Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0203 ATGGAAACAACAAAAGTAATTGAAGAAGATGTTGTGATTGTTGGAGCTGGAATTGCTGGTCTTTGTACAGCCTTAGGACTTCACAGGTTGGGTGTAAGAAGTTTGGTATTGGAATGTTCAGATAGTTTGAGAGTAACTGGATTTGGTTTAGCAATATGGGAAAATGCTTGGAAGGCTTTGGATGCTGTTGGTGTTGGAGATATACTTCGACACAAACATATACATCTTTATGGGAATGTGGCTACTTCTTTGATTAAGGGGCAACAAATAGCAACTACATCTTTTAGGGATAAAGAAAAGCTTGAACTGCGTTGTGTTAGAAGGAAATTATTGTTGGAAGCACTTGCCAGTGAGCTTCCAAGTGGTACCATTAGGTATTTATCTAAAGTTGTTGCTGTTGAGGTATCTGGCTTCTCTAAGGTACTTCATCTTCATGATGGAACAACCATCAAAACCAAGGTATTGATAGGGTGTGATGGAGTGAACTCTGTGGTGGCAAAATGGTTAGGCTTTAAGGAAGCCACTTATACCGGGAGATATGCAATCCGTGGTTGTGCAGAGTTAGAAAACCATCACAATTTTGAGCCTGTGCTTATGCATTTCTTTGGCAAAGGTTTTAGAGCTGGAGTTGTTCCATGTGATGAAAAAATTGTTCACTGGTTTTTTACTTGGACTCCTACCATCCAAGATAAAGAGCTAATAGAGAACCCTGCTAAACTAAAAGAGTATGTGTTAAGCAAATTAGAGAAGATGCCAAATGATGTTAGATATTTCATAGAAAAAACTGAATTAGATGCATTTCAATCAACTCCATTGAGATATAGACATCCTTGGGAGCTTATAATGGGAAATATTAGTAAAGACAATGTTTGTGTGGTTGGAGATGCTTTACATCCTATGACACCCGATCTTGGCCAAGGGGGGTGTTGTGCTTTAGAGGATGGGGTGGTTTTAGCAAGGTGTCTAGCTGAGGCTTTTTCCTACAAACCAATGGAAGAAGATGAACAATTCAAAAGAATTGAGGAAGAATTGAAAAAATATGCAAATGAAAGAAGATGGAGATGCATTGATCTTATTGCTACATCTTATATTGTTGGTTTTATTCAGCAAGGTGATTCAAAATTGGTTACCTTTTTAAGGGACAAAATTTTAGGTCCATTACTAGCTGGTCAGTTATTGAAGAAGACTAGTTTTAATTGTGGTAAACTGAATAGCCCTTAA 1221 0.3776 METTKVIEEDVVIVGAGIAGLCTALGLHRLGVRSLVLECSDSLRVTGFGLAIWENAWKALDAVGVGDILRHKHIHLYGNVATSLIKGQQIATTSFRDKEKLELRCVRRKLLLEALASELPSGTIRYLSKVVAVEVSGFSKVLHLHDGTTIKTKVLIGCDGVNSVVAKWLGFKEATYTGRYAIRGCAELENHHNFEPVLMHFFGKGFRAGVVPCDEKIVHWFFTWTPTIQDKELIENPAKLKEYVLSKLEKMPNDVRYFIEKTELDAFQSTPLRYRHPWELIMGNISKDNVCVVGDALHPMTPDLGQGGCCALEDGVVLARCLAEAFSYKPMEEDEQFKRIEEELKKYANERRWRCIDLIATSYIVGFIQQGDSKLVTFLRDKILGPLLAGQLLKKTSFNCGKLNSP* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0203 406 Pfam FAD binding domain 10 326 IPR002938 GO:0071949
Tpr1g0203 406 PANTHER MONOOXYGENASE 2-RELATED 7 404 - -
Tpr1g0203 406 SUPERFAMILY FAD/NAD(P)-binding domain 10 389 IPR036188 -
Tpr1g0203 406 Gene3D - 10 383 IPR036188 -
Tpr1g0203 406 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 7 404 IPR044560 -
Tpr1g0203 406 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 - -
Tpr1g0203 406 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 - -
Tpr1g0203 406 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 - -
Tpr1g0203 406 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0203 Tpr-Chr1 1671550 1673922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0203 9 404 Miscellaneous Gene Families AT5G05320 52.618 3.20e-154 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0203 - - mtr:MTR_1g112780 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0203 1 1671550 1673922 Tpr1g0203 1 1671550 1673922 ECH