Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0189 ATGGCGACGGCGGCGACACCATCGTGGCAACCACAAGAACAAGGGTTCAAAGAGATCTGCGCTCTATTAGAGCAACAGATTTCTCATTCTTCTTCCGCTGATAAGTCTCAGATTTGGAACCAAATTCAACAATACTCCAATCTTCCTGACTTCAACAATTACCTTGTCTTCATCTTTACTCGTGCTCAGGGAATATCTGTGGAGGTTCGGCAGGCTGCAGGATTATATCTGAAGAATAACATGAAAAACGTATATAATTTAATGCAGCCTGAGTACCAGCAATACGTGAAATCAGAGTTGCTGCCTTGTCTTGGTGCAGCAGATAAGCACATAAGATCTACGACGGGAACTATTATCAGTGTTGTTGTTCAAACCGGAGGAATTTCACGGTGGCCTGAATTATTGCAAGCCCTTGTAAGTTGCTTGGACAGTAGTGATCTAAATCACATGGAAGGTGCGATGGATGCATTATCCAAGATTTGTGAAGATGTTCCCCAAATTCTTGACTCTGATGTACCAGGGTTAGCAGAGCGTCCCATCAATATATTTCTTCCCAGATTATTTCGGTTTTTCCAATCACCTCACGCTACATTAAGAAAGCTATCGCTGGGTTCTGTTAATCAATACATTATGTTGATGCCTTCTGCCTTATATGTATCCATGGATCAATATCTTCAAGGTCTGTTTATTCTTGCAAATGACCCTACTGCAGAAGTGCGGAAGTTGGTTTGTGCAGCATTTGTCCAGCTGATTGAAGTCCGTCCGTCTGTCTTGGAGCCACATCTAAGGAATGTGATTGAATATATGTTACAAGTCAACAAGGACCCAGATGAAGAAGTGGCCCTTGAATCCTGTGAATTTTGGTCGGCATATTGTGATGCTCAAATGCCACCAGAAAACTTGAGAGAATATTTGCCTCGTCTTATTCCAATATTGTTGTCAAACATGGCTTATGCAGATGATGATGAATCACTTATTGAAGCTGAGGAAGAGGGTTCTCAACCTGATCGAGATCAGGATCTTAAACCTCGATTTCATGTATCAAGGTTTCATGGATCAGATGAAGTAGAAGATGATGATGATGATGTTGTTAATACTTGGAATTTACGGAAATGTAGTGCAGCTGCTCTAGATATTCTCTCGAACGTGTTTGGAGATGAGATCCTTCCCACTCTGATGCCTATTGTTGAGGCCAAGCTGTCAACTGTCGGAGATGATGGCTGGAAAGAAAGGGAAGCTGCTGTCTTGGCACTTGGTGCCATAGGCGAGGGTTGCATCAATGGTCTTTATCCTCATCTGCCAGAGATTGTGGCATTTCTTATCCCTCTTCTTGATGATAAGTTTCCTCTGATACGAAGTATTTCATGCTGGACAGTATCTCGGTTTAGCAAATTTATTATTCAGGGTATTGGGCATGCCAAGGGTTATGAACAATTTGATAACGTTCTTATGGGTCTTCTTCGAAGAATTTTGGATGATAATAAGCGTGTACAAGAGGCTGCTTGTTCAGCTTTTGCAACTCTGGAAGAGGAGGCTGCTGAAGAGCTGTCACCACGCTTGGAAATCATATTAAAGCACCTGATGGTTGCATTTGGGAAATATCAGAGGCGAAATCTCAGAATTGTATATGATGCTGTTGGAACTCTAGCTGAAGCTGTTGGGGGAGAGCTGAATCAGCCTGTTTATCTTGACATTCTCATGCCACCATTAATTGAGAAGTGGCAACAACTTTCAAATTCAGACAAAGATCTCTTTCCACTCCTAGAATGCTTCACATCTATAGCACATGCACTGGGTACTGGATTCACTCCATTTGCTGAACCTGTATTTAGGAGGTGCATAAATATAATTCAGACCCAACAATTGGCTAAGGCCAATCCTGCTGCGGCTGGGGCTCAGTATGACAAGGAATTCATTGTATGCTCTCTTGATCTTCTTTCTGGACTAGCAGAAGGTCTTGGCAGTGGAGTAGAGAGTTTGGTTTCACAATGTTCTTTGAGGGACCTACTTTTGCATTGTTGTACAGATGATGCTCCCGATGTTCGACAAAGTGCCTTTGCCTTACTTGGAGACCTTGCTCGAGTGTGCGTGGTTCATTTGCACCCTCGCTTGTCTGAGATTCTTGAACTTGCTGCCAAACAACTGGAAATTTCTAAGGTACATGCGGCTATTTCAGTAGCAAATAATGCATGCTGGGCGATTGGAGAATTAGCAGTTAAGGTTCGTCAAGAAATTTCACCGTTCGTTTTAAGTGTAATTTCATGCTTGGTACCAATTCTTCAGCATGCAGAGGGACTCAACAAGTCACTTATAGAAAATAGTGCAATAACACTGGGGAGGCTTGCATGGGTCTGTCCAGACCTTGTATCACCACATATGGAGCATTTCATGCAACCTTGGTGCACTGCTCTTTCAATGATACGAGATGATGTTGAGAAAGAGGATGCTTTTAGAGGTCTATGTGCCATGGTCAAAGCCAATCCTTCTGGAGCTCTAAGTTCGCTTGTTTACATGTGTAAAGCCATTGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGAAGTCTGCCAGGTCTTGCACGGATATAAACAGATGCTGCGCAATGGAGCATGGGACCAGTGCATGTCTGCTTTGGAGCCACCAATAAAAGAAAAGCTTTCAAAATATCAAGTATAA 2682 0.4262 MATAATPSWQPQEQGFKEICALLEQQISHSSSADKSQIWNQIQQYSNLPDFNNYLVFIFTRAQGISVEVRQAAGLYLKNNMKNVYNLMQPEYQQYVKSELLPCLGAADKHIRSTTGTIISVVVQTGGISRWPELLQALVSCLDSSDLNHMEGAMDALSKICEDVPQILDSDVPGLAERPINIFLPRLFRFFQSPHATLRKLSLGSVNQYIMLMPSALYVSMDQYLQGLFILANDPTAEVRKLVCAAFVQLIEVRPSVLEPHLRNVIEYMLQVNKDPDEEVALESCEFWSAYCDAQMPPENLREYLPRLIPILLSNMAYADDDESLIEAEEEGSQPDRDQDLKPRFHVSRFHGSDEVEDDDDDVVNTWNLRKCSAAALDILSNVFGDEILPTLMPIVEAKLSTVGDDGWKEREAAVLALGAIGEGCINGLYPHLPEIVAFLIPLLDDKFPLIRSISCWTVSRFSKFIIQGIGHAKGYEQFDNVLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELSPRLEIILKHLMVAFGKYQRRNLRIVYDAVGTLAEAVGGELNQPVYLDILMPPLIEKWQQLSNSDKDLFPLLECFTSIAHALGTGFTPFAEPVFRRCINIIQTQQLAKANPAAAGAQYDKEFIVCSLDLLSGLAEGLGSGVESLVSQCSLRDLLLHCCTDDAPDVRQSAFALLGDLARVCVVHLHPRLSEILELAAKQLEISKVHAAISVANNACWAIGELAVKVRQEISPFVLSVISCLVPILQHAEGLNKSLIENSAITLGRLAWVCPDLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCAMVKANPSGALSSLVYMCKAIASWHEIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0189 893 Pfam Importin-beta N-terminal domain 39 105 IPR001494 GO:0006886|GO:0031267
Tpr1g0189 893 ProSiteProfiles Importin-beta N-terminal domain profile. 38 106 IPR001494 GO:0006886|GO:0031267
Tpr1g0189 893 PANTHER TRANSPORTIN 1 ISOFORM 1 9 891 - -
Tpr1g0189 893 PANTHER IMPORTIN BETA 9 891 IPR040122 GO:0006606
Tpr1g0189 893 Pfam HEAT-like repeat 408 461 - -
Tpr1g0189 893 Pfam HEAT repeat 668 696 IPR000357 GO:0005515
Tpr1g0189 893 Gene3D - 6 893 IPR011989 -
Tpr1g0189 893 SUPERFAMILY ARM repeat 9 883 IPR016024 -
Tpr1g0189 893 SMART IBN_N_2 38 106 IPR001494 GO:0006886|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0189 Tpr-Chr1 1513463 1525411 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0189 K18752 - gmx:100792702 1626.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0189 1 1513463 1525411 Tpr1g0189 1 1513463 1525411 ECH