Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0188 ATGAGCAACCCAAAAACACTTATAGAATTTTTTGAAAAGGAAAAGCCTCTTGTACCATCTTCACCTACTTCAGGAAATGAAGAAATTCTCTCAACAGTTTCATACTGCACCTTTGTTTTCACATTCACTGACCCTTCAGAATCTCCTGCACAAAGAGACTCTAAGAGACTTCAACTTTCAAGACTCATAGCTATGTTGAAATCCTCCAAAAAACCAGTGCATGAAAAAGTTGTAGGACCTTTAGTATCAATGATCAAAGCCAATCTTTTTAGGCCACTCCCTCCACCTACAAACCCTTCTGCTATATCAGAATTTCTTGATGAAGAAGATCCTATTTCAATATTTTCACCTTTATGGTCACATCTACAAATAGTTTATGAAATCTTACTTAGGCTTGTTAATAGCACAGACAGCAAAATACTTAGAAACTATATGGACCATTCTTTCCTTCTTAATCTGTTATCGCTTTTCCAATCCGAAGATCCGAGGGAACGCGAGAGTTTGAAAAATGTGTACCATAAGATATATTCTAAGTTTGTTTGCGACCGTTCTGCGATGAGGAAATCAATGACTGATGTTTTGTTGAACTATGTTTTTGAGACTGAGAAACATTCTGGTATTGCTGACTTGCTTGAGATATGGGGAACTATTGTTAATGGCTTTACCGTGCCACTCAAGGAAGAGCATAAGTTGTTTCTTATGAGAGTGTTGATTCCTTTACATAAGACTAAAGGGATGCAAGTTTATCATAGACAACTTGCTTATTGTATATCACAGTTTGTGCAGAAGGAGCCTATGCTTGGAGGTGTTGTTGTAAGGGGAATTTTGAGATATTGGCCTGTTACAAATTGTCAAAAGGAAATTTTGTTGATCGGTGAATTGGAAGATCTTGTCGAGAATTTGGATCCTGATCAATATCGTAAATTGGCCTTGCCGATATGTACTCAGATTACAAAATGCATCAACAGTTGGAATTCTCAGGTAGCTGAAAGGGCACTATATGTATGGAACAATGAGCAGTTCTATAAAATGGCAACAACGGGAACAGTAGAAGTACTTCCAGTGATAGTAGAAGGTGTGGAAAAGAACTTGAAATTGCATTGGAGCAAGAGTGTTAGGCAGTTAACAGAAAGTGTGAAGGTGGTGGTGGAAGATATTGATCCAGATTTATATGCAAAAGCTCAAATGGACATGAAAGTTAAAGAATCAGAAGCACATCAAAAAGATATAAAGAGAAAAAAGACATGGGAAAGAATTGAATTGGCAGCTTCTAAGAATCAGTTTGTGAATCCACAAAGATACATATGTGTCTCAAACTGA 1320 0.3697 MSNPKTLIEFFEKEKPLVPSSPTSGNEEILSTVSYCTFVFTFTDPSESPAQRDSKRLQLSRLIAMLKSSKKPVHEKVVGPLVSMIKANLFRPLPPPTNPSAISEFLDEEDPISIFSPLWSHLQIVYEILLRLVNSTDSKILRNYMDHSFLLNLLSLFQSEDPRERESLKNVYHKIYSKFVCDRSAMRKSMTDVLLNYVFETEKHSGIADLLEIWGTIVNGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYHRQLAYCISQFVQKEPMLGGVVVRGILRYWPVTNCQKEILLIGELEDLVENLDPDQYRKLALPICTQITKCINSWNSQVAERALYVWNNEQFYKMATTGTVEVLPVIVEGVEKNLKLHWSKSVRQLTESVKVVVEDIDPDLYAKAQMDMKVKESEAHQKDIKRKKTWERIELAASKNQFVNPQRYICVSN* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0188 439 Gene3D - 22 421 IPR011989 -
Tpr1g0188 439 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 18 424 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr1g0188 439 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 18 424 - -
Tpr1g0188 439 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 20 423 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr1g0188 439 PIRSF PP2A_B56 11 437 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr1g0188 439 SUPERFAMILY ARM repeat 28 408 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0188 Tpr-Chr1 1509892 1512208 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0188 K11584 - gmx:100802007 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0188 1 1509892 1512208 Tpr1g0188 1 1509892 1512208 ECH