Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0187 ATGGAAGGATTAAGAGGACTTGGTCATTTATTTGTGACAATGTTTATAGCAGGTGTTGGAGGATTTATAGCTATTCCTTCAATAACAGATGTAACAATGTCTGCACTATGTCCTGGTCAAGATGAATGCTCTCTTGCCATTTACCTCACTGGTTTTCAACATGCTATGATTGGAGTTGGGTCAGTGGTTACGACACCATTAATTGGAAATTTGTCTGATCGCTACGGTAGGAAAGTCTTGATCACACTTCCTCTCACCGTCTCTCTCATTCCTCAAGCAATATTGGCATATAGCAGGGAAACAAAATTCTTCTATGCATACTATTTGGTGAAAACTCTTGCTGCCCTTGCAGGCGAAGGCAGCCTCCATTGCTTAGCTCTTGCATATGTGGCAGACAAAGTTCCAGTTGGAAAACGAGCATCAGCATTCGGAATACTTGCTGGTGTTGGATCAGCATCGTTTGTTGGTGGAACATTAGCTGCTAGATTCTTATCCACGGCTTTGACATTTCAGGTTGCTTCAGTGTTCTCAATGATAGCATTGGTGTACATGAGAATTTTCCTCAAGGAAAGTGAACCTATGAGGCAGCCATTGTTGAAAGAGGCAGATGAACCATGCATTCAACAGTGTGAGGATGATATGCCTCAAAGAACATTTAAGAAACTGCCTTCAATGGGGGATGTAATTTGTTTGCTCAAGTGTAGCCCTACATTCTCACAAGCAGCAATTGTTTTGCTCTTCAATAGTCTTGCTGATGGCGGCTTGATGTCTATTTTGATGTATTATTTGAAGGCACGTTTTCAATACAACAAGAATCAGTTTGCCGATTTGATGATGATTTCCGGGATTGGAGCTACTCTGACACAACTATTCCTCATGCCCATATTAGTACCTGCTGTAGGAGAGGAGAAGTTGCTCACAACAGGTCTCTTTGTTTCCTGCATAAGTATCCTCGTGCACAGCATAGCATGGTCAGCATGGGTTCCTTATGCTCTAGCAGGTTTCTCAGTTTTAGGAGTTCTAGTGCGCCCAACTATAACCAGCATTGCATCCAAACAAGTTGGACCTAACGAACAGGGAATGCTTCAAGGATGTCTCTCAGGAGTCACTTCTGTCGCCAACATAATTTCTCCGCTAGTTTTCAGTCCACTGACAGCCTTATTCCTGTCAGAAGATGCACCATTTAATTTTCCTGGATTCAGCCTAATGTGCCTTGGGCTAATACTGATGACAGCATTTTTCCTTAGTCTAATGATTCGCGCTCCTCCTCCTATTGTGGGTGACAAAGTTAGTAAAAACTGCTGCACAGAAACCTTGGTCTGA 1323 0.4271 MEGLRGLGHLFVTMFIAGVGGFIAIPSITDVTMSALCPGQDECSLAIYLTGFQHAMIGVGSVVTTPLIGNLSDRYGRKVLITLPLTVSLIPQAILAYSRETKFFYAYYLVKTLAALAGEGSLHCLALAYVADKVPVGKRASAFGILAGVGSASFVGGTLAARFLSTALTFQVASVFSMIALVYMRIFLKESEPMRQPLLKEADEPCIQQCEDDMPQRTFKKLPSMGDVICLLKCSPTFSQAAIVLLFNSLADGGLMSILMYYLKARFQYNKNQFADLMMISGIGATLTQLFLMPILVPAVGEEKLLTTGLFVSCISILVHSIAWSAWVPYALAGFSVLGVLVRPTITSIASKQVGPNEQGMLQGCLSGVTSVANIISPLVFSPLTALFLSEDAPFNFPGFSLMCLGLILMTAFFLSLMIRAPPPIVGDKVSKNCCTETLV* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0187 440 Pfam Major Facilitator Superfamily 10 378 IPR011701 GO:0022857|GO:0055085
Tpr1g0187 440 ProSiteProfiles Major facilitator superfamily (MFS) profile. 13 424 IPR020846 GO:0022857
Tpr1g0187 440 SUPERFAMILY MFS general substrate transporter 11 421 IPR036259 -
Tpr1g0187 440 CDD MFS_SLC46_TetA_like 10 418 - -
Tpr1g0187 440 PRINTS Tetracycline resistance protein signature 50 69 IPR001958 GO:0022857
Tpr1g0187 440 PRINTS Tetracycline resistance protein signature 143 165 IPR001958 GO:0022857
Tpr1g0187 440 PRINTS Tetracycline resistance protein signature 362 385 IPR001958 GO:0022857
Tpr1g0187 440 Gene3D MFS general substrate transporter like domains 5 418 IPR036259 -
Tpr1g0187 440 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 6 428 - -
Tpr1g0187 440 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 6 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0187 Tpr-Chr1 1493538 1500305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0187 2 437 Organic Solute Cotransporters AT2G16990 43.046 2.66e-119 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0187 - - gmx:100805770 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0187 1 1493538 1500305 Tpr1g0187 1 1493538 1500305 ECH