Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0185 ATGAACAAGCGACCAAGGAACACTGTTTACAAGCCCCTTCGCGATCTTTCCAATCGAGAGCTCGGCGAATTACCCGCCAGAAATTTCCCTAACCGTCTCGCCGCCTCCGAGGATCTTGTACTTCGACTTGATGTATTCAGAAAGCTCGAAAAGCACAGAGGTTGTGTGAACACTGTATGCTTCAATGCAGATGGTGACATTCTCGTTTCGGGTTCTGATGACAGAAGGATTATTCTCTGGGATTGGCAAACTGGTCGTAGTAAATTATCTTTCCATTCTGGTCATAGTAACAATGTTTTCCAGGCTAAGTTTATGCCTCACTGTGATGATCGAAGCATCATCACTTGCGCTGCTGATGGCCAGGTGAGACATGCTCAAATCCTTGAAAATGAAGGAGTGGAAACTAAGTTGTTGGGCAGTCATCAAGGACGCGCTCATAAGTTGGCTATTGAGCCTGGTAGCCCTCATATATTTTATACCTGCGGTGAAGATGGATTAGTACAGCATTTTGATCTGAGAACTGGGGCTGCAACGGAACTTTTCACCTGCAAGCCACTTAAGGATAGATGGAATTACATGCCAGTCATCCATCTTAATACAATTGCAATTGATCCAAGGAACCCAAATCTCTTTGCGGTTGCTGGGTCTGACGAGTATACGCGACTTTTTGATATCCGCAAGTATAAATGGGACGCATCAACTGATTTTGGTCAACCGACCGACTACTTTTGTCCTCCGCATTTGATTGGAGATGAGCGAGTAGGAATAACAGGCCTGGCCTTTTCTGAACAAAGGGAGCTTCTTGTGTCCTACAATGATGAATTTATTTACCTTTTTACACAAGATATGGGTTTGGGACCGGATCCTGTTCCTGGGTCCCCTATATCTGTGGATAGTGATACAAGTGAAACGGGAGGTAGTCATGGATCTGTGCAATCTCCATCAAAGATGGATGCTGATGAGAAAATCACCCCTCAAGTTTTTAAGGGACACAGGAATTGCGAGACAGTCAAGGGTGTTGGTTTTTTTGGGCCTAATTGTGAGTATGTAGTGAGCGGATCAGACTGTGGTCGGATTTTCACATGGAAGAAGAAAGGTGCTCAGCTTATTCGTGTCATGGAAGCAGACAAGCATGTTGTGAACTGTATTGAGTCTCATCCTCATACAACAGTTCTTGCAAGCAGCGGTATTGAGCATGACATCAAGATATGGACTCCAAAGGCCCTCGAGAAAGCTGTTTTGCCCAAAAATATTGAGCAGAAACCCAAGGCTAGGGGCTGGATGTACCAGATAGATTCTCCGGAAGACTTGATGTTGCAACTGTTTTCACTTCCAAGACGGAGGGTTAGGACAGAAACCAATGCAGAACGTTCAACTGCAACTGCAGATCGAGAACTTTTAGAGTTGATATTGACATTCAATACTATTAGTGATGATTCTACTGATGATGATGATGGTGGTGATGATGATGGAGATGCAACCATCCAAGATGACTTGTTCAGTTGA 1506 0.4436 MNKRPRNTVYKPLRDLSNRELGELPARNFPNRLAASEDLVLRLDVFRKLEKHRGCVNTVCFNADGDILVSGSDDRRIILWDWQTGRSKLSFHSGHSNNVFQAKFMPHCDDRSIITCAADGQVRHAQILENEGVETKLLGSHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCKPLKDRWNYMPVIHLNTIAIDPRNPNLFAVAGSDEYTRLFDIRKYKWDASTDFGQPTDYFCPPHLIGDERVGITGLAFSEQRELLVSYNDEFIYLFTQDMGLGPDPVPGSPISVDSDTSETGGSHGSVQSPSKMDADEKITPQVFKGHRNCETVKGVGFFGPNCEYVVSGSDCGRIFTWKKKGAQLIRVMEADKHVVNCIESHPHTTVLASSGIEHDIKIWTPKALEKAVLPKNIEQKPKARGWMYQIDSPEDLMLQLFSLPRRRVRTETNAERSTATADRELLELILTFNTISDDSTDDDDGGDDDGDATIQDDLFS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0185 501 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 49 86 - -
Tpr1g0185 501 MobiDBLite consensus disorder prediction 478 495 - -
Tpr1g0185 501 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 10 475 IPR045151 -
Tpr1g0185 501 SMART WD40_4 366 405 IPR001680 GO:0005515
Tpr1g0185 501 SMART WD40_4 241 280 IPR001680 GO:0005515
Tpr1g0185 501 SMART WD40_4 84 126 IPR001680 GO:0005515
Tpr1g0185 501 SMART WD40_4 189 224 IPR001680 GO:0005515
Tpr1g0185 501 SMART WD40_4 321 363 IPR001680 GO:0005515
Tpr1g0185 501 SMART WD40_4 42 81 IPR001680 GO:0005515
Tpr1g0185 501 SMART WD40_4 131 171 IPR001680 GO:0005515
Tpr1g0185 501 ProSiteProfiles Trp-Asp (WD) repeats profile. 49 90 IPR001680 GO:0005515
Tpr1g0185 501 SUPERFAMILY WD40 repeat-like 41 404 IPR036322 GO:0005515
Tpr1g0185 501 MobiDBLite consensus disorder prediction 297 318 - -
Tpr1g0185 501 Gene3D - 37 407 IPR015943 GO:0005515
Tpr1g0185 501 Pfam WD domain, G-beta repeat 370 404 IPR001680 GO:0005515
Tpr1g0185 501 Pfam WD domain, G-beta repeat 47 81 IPR001680 GO:0005515
Tpr1g0185 501 MobiDBLite consensus disorder prediction 478 501 - -
Tpr1g0185 501 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN-CONTAINING PROTEIN-RELATED 10 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0185 Tpr-Chr1 1485107 1489402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0185 K11804 - gmx:100791300 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0185 1 1485107 1489402 Tpr1g0185 1 1485107 1489402 ECH