Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0175 ATGGCGACTACGGAGGAGGTGAAACTCGATCAACTTCCTTACGCTCTTCTCGCCACCATCATGACCAAACTCGACATCGCTTCCGTCTGTTCATTGTCCGCCACATCCTCCACCTTCCGCTCATGCGCTAAACAAATCCTCTCCTTCCTCCCCAATTTCCATCTCGTCGATATTGCGCCTTCTGAGGAGTTGATCACACCGTTGTTGCCACCAAATCCATATCTTAAGAGTCTCAAAGTTGATTGTGGTCGTCTTGATGATTCCGCAATCAATTTATTGGTGAAACCGTCTTTGCATGAACTTTCTTTGTATAATTGTGCTGATTTTAGTGGGAAACTTCTATCTGAAATCGGGACTCAATGCAAAGACCTAAGGTCTCTCTATTTGGGTTCTGTTGCGGAAAAAAGAGGGAGGGCAATTCATATATCTGATTTGGAGGAGTTACTCAGTGGTTGTTCCCAATTGGAAGTTTTGATTCTAATGTTTGATGTCTCTCTCTTTCTACGTCATAACTTAGCTCGAGTTTGGGCTTCTGCTTCTGAGAAACTTACTTCTCTTGAAATTGGATATATTTCTTCAGTTACGGTGATTGAACTGTTCAGCTCAAATTTGGTACCTCATCAGCCCCTTAATCCTATTCAACCATCCATACTTCCTGGAATTCAAAAATTGTGTCTTTCTGTAAACTATATAACGGATGCTATGGTTGCCACAATATCCCAAAGTCTCACCTTTTTAACCCATTTAGATCTTCGTGATGCTCCATTTGTTGAACCAAGAATTACATTTGATCTAACCAATTCCGGTCTTCAGCAAATTAATCAACTTGGGAGATTGAAACATCTTTCATTGATCCGAAGCCAAGAGTTCATAATTTGCTATTTCCGTAGAGTAAACGATCTAGGGTTACTCTTAATGGCTGACAAGTGTGCAAACATGGAGAGCATATGCCTTGGCGGCTTTTGTCGTGTCACAGACACCGGAATCAAAACTATGCTGCACTCTTGCTCTTGTTTATATAAGCTTAAGGTCACTCATGGGACTCAATTAACTGATCTAGTTTTTCATGATATATCTGCAACATCCCTTACTTTAACACATGTGAGCTTAAGATGGTGCAAGTTGTTAACTGATCATGCAGTTATTAGTTTGACATCAAACAAGGAACTTAAGGTTCTCGACCTGAGGGATTGCAGAAGCCTTGGGGATGAAGCTCTCCGAGCCATTGGCGTACTCTTGAGACTGAAAATTTTACTAATTGATGGCTCTGATATAACTGATGCTGGACTTTCATACTTACGACCGACCGTTATTAATTCATTGTATGCATTGTCTCTTCGAGGGTGCAAGAGACTCACAGATAAATGTATAACAGTTCTGTTTGATGGTTGTGGCAAGCTAGAATTAAGAGACCTAGATCTATCAAATCTTCCTAACCTCTCGGATAATGGAGTTTTACAATTGGCGAAAAGCCGAATTCCTTTTTTGGATATCCGAATGCGACAATGCCCTCTAATTGGTGATACCTCAATCATGGCACTGGCTTCAATGATGATTGATGATGCTGGATGGTATGAAAGCGGCTTGCGCTTGTTGGATCTGTATAACTGTGGTGGCATTACGCCACTTGCCTTTCGTTGGTTAAAGAAACCGTATTTTCCAAGGCTTAAATGGCTGGGTGTGACTGGAAGTGTTAATAGAGACATGGTAGATGCTTTAGCTAGAAGTAGACCTTTCTTGTATGTGGCATGCGACGGTGAGGAGCTTGGGCCTGACCCCTGTGATATGTCAGATGGTTTATATACACATGATTATGATGAGGTGGATGAATTTGAGCAGTGGCTTCTTGAAGCTGATTATGAGACTGATGATGAAGAAATGGTTGATGCTGAAATTAATGAAGAACTAATAATGTAG 1917 0.4121 MATTEEVKLDQLPYALLATIMTKLDIASVCSLSATSSTFRSCAKQILSFLPNFHLVDIAPSEELITPLLPPNPYLKSLKVDCGRLDDSAINLLVKPSLHELSLYNCADFSGKLLSEIGTQCKDLRSLYLGSVAEKRGRAIHISDLEELLSGCSQLEVLILMFDVSLFLRHNLARVWASASEKLTSLEIGYISSVTVIELFSSNLVPHQPLNPIQPSILPGIQKLCLSVNYITDAMVATISQSLTFLTHLDLRDAPFVEPRITFDLTNSGLQQINQLGRLKHLSLIRSQEFIICYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGIKTMLHSCSCLYKLKVTHGTQLTDLVFHDISATSLTLTHVSLRWCKLLTDHAVISLTSNKELKVLDLRDCRSLGDEALRAIGVLLRLKILLIDGSDITDAGLSYLRPTVINSLYALSLRGCKRLTDKCITVLFDGCGKLELRDLDLSNLPNLSDNGVLQLAKSRIPFLDIRMRQCPLIGDTSIMALASMMIDDAGWYESGLRLLDLYNCGGITPLAFRWLKKPYFPRLKWLGVTGSVNRDMVDALARSRPFLYVACDGEELGPDPCDMSDGLYTHDYDEVDEFEQWLLEADYETDDEEMVDAEINEELIM* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0175 638 SUPERFAMILY RNI-like 214 456 - -
Tpr1g0175 638 SMART LRR_CC_2 438 463 IPR006553 -
Tpr1g0175 638 SMART LRR_CC_2 526 551 IPR006553 -
Tpr1g0175 638 SMART LRR_CC_2 466 491 IPR006553 -
Tpr1g0175 638 SMART LRR_CC_2 493 517 IPR006553 -
Tpr1g0175 638 SMART LRR_CC_2 243 276 IPR006553 -
Tpr1g0175 638 SMART LRR_CC_2 95 120 IPR006553 -
Tpr1g0175 638 SMART LRR_CC_2 362 387 IPR006553 -
Tpr1g0175 638 SMART LRR_CC_2 388 412 IPR006553 -
Tpr1g0175 638 SMART LRR_CC_2 310 335 IPR006553 -
Tpr1g0175 638 SUPERFAMILY RNI-like 53 284 - -
Tpr1g0175 638 Gene3D Ribonuclease Inhibitor 414 588 IPR032675 -
Tpr1g0175 638 Pfam F-box domain 9 46 IPR001810 GO:0005515
Tpr1g0175 638 Pfam Leucine Rich repeat 387 409 IPR001611 GO:0005515
Tpr1g0175 638 Gene3D Ribonuclease Inhibitor 58 413 IPR032675 -
Tpr1g0175 638 SUPERFAMILY F-box domain 8 44 IPR036047 GO:0005515
Tpr1g0175 638 PANTHER RNI-LIKE SUPERFAMILY PROTEIN-RELATED 12 563 - -
Tpr1g0175 638 SUPERFAMILY RNI-like 415 550 - -
Tpr1g0175 638 PANTHER UNCHARACTERIZED 12 563 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0175 - - gmx:100789353 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0175 1 1398355 1401732 Tpr1g0175 1 1398355 1401732 ECH