Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181257g00017 ATGTTTCCAGGAAATTTTTTCCCGTTTTGTGGCTTAAGCAAAAATGATAAGAACAAGGCCAGAGTTGAATTGAATGGGAGAGCGAATGGTGGTAATAAAAGAGAAGGCAATTCCAACAATGATGATAAAAATCAACTTTCTTTGGACGTGAAGAAGTTGAAGTTGAGAGAGGATGATGGCAACACCAGCAACGTCAACAAAGCCATGACCTTTACTTTTGATGAGCTTGCTGCTGCAACAGGGAATTTCAGGCCAGATTGTTTTCTTGGTGAAGGAGGGTTTGGCAAGGTTTACAAGGGCCACTTGGACAGGATAAACCAGGTTGTAGCTATAAAGCAACTTGACCCCCACGGCCTTCAAGGAACTAGGGAATTTGTTATAGAAGTTTTGACATTGAGTATGGTAGATCATCCTAATCTTGTCAAGTCTATTGGGTATTGTGCTGAAGGAGATCAGAGGCTTCTGGTTTATGAATACATGCCATTGGGATCTTTGGAGAACCATTTACATGATCTTCCACCGGGGAAAAGACCTTTAAGTTGGAATACAAGGATGAAAATCGCGGCCGGCGCAGCCAAGGGGTTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTAATTTACCGTGATCTGAAATGCTCAAACATTTTGTTAGACGAGAAATATCATGCCAAATTGTCTGATTTCGGGTTGGCGAAAGTAGTCCCTAGTGGCGATAAGTCTCATGTTTCGACGAGGGTTATGGGCACTTATGGCTACTGTGCTCCAGATTATGCAATGACTGGTCAGTTGACATTCAAGTCTGATATTTACAGCTTCGGTGTTGTTCTTTTGGAGCTTATCACAGGAAGGAAAGTCATCGACCACAGAAGACCCGAAAAGGAAGAAAATCTAGTTGCATGGGCAAGGCCATTATTCAAAGACAGGAAAAGATTCTCAGAGATGGTTGATCCATTGCTTGAAGGTAAATATCCAGTGAGAGGCTTGTACCAAGCACTCGCCATTGCGGCCATGTGTCTACAAGAGCAGCCTAATATGCGGCCTGCCACGGCGGATGTGGTTACAGCTCTAGATTTCCTTGCTTCACAGAAATATGATCCCAATTCTACCACTCCAAACTCAAAAAGTCCATCAGTTTCTCCAACAATTCAGAAAACGGATGACAATTGA 1170 0.4291 MFPGNFFPFCGLSKNDKNKARVELNGRANGGNKREGNSNNDDKNQLSLDVKKLKLREDDGNTSNVNKAMTFTFDELAAATGNFRPDCFLGEGGFGKVYKGHLDRINQVVAIKQLDPHGLQGTREFVIEVLTLSMVDHPNLVKSIGYCAEGDQRLLVYEYMPLGSLENHLHDLPPGKRPLSWNTRMKIAAGAAKGLEYLHDKMKPPVIYRDLKCSNILLDEKYHAKLSDFGLAKVVPSGDKSHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKVIDHRRPEKEENLVAWARPLFKDRKRFSEMVDPLLEGKYPVRGLYQALAIAAMCLQEQPNMRPATADVVTALDFLASQKYDPNSTTPNSKSPSVSPTIQKTDDN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181257g00017 389 Gene3D Phosphorylase Kinase; domain 1 52 159 - -
Stsc181257g00017 389 SUPERFAMILY Protein kinase-like (PK-like) 67 373 IPR011009 -
Stsc181257g00017 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Stsc181257g00017 389 PANTHER OS07G0668900 PROTEIN 43 369 - -
Stsc181257g00017 389 Gene3D Transferase(Phosphotransferase) domain 1 160 378 - -
Stsc181257g00017 389 Pfam Protein kinase domain 89 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181257g00017 389 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181257g00017 389 MobiDBLite consensus disorder prediction 365 389 - -
Stsc181257g00017 389 FunFam probable serine/threonine-protein kinase RLCKVII 55 159 - -
Stsc181257g00017 389 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Stsc181257g00017 389 MobiDBLite consensus disorder prediction 25 45 - -
Stsc181257g00017 389 FunFam Serine/threonine-protein kinase PBS1 160 375 - -
Stsc181257g00017 389 CDD STKc_IRAK 89 358 - -
Stsc181257g00017 389 SMART serkin_6 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181257g00017 Stsc-Chr181257 99075 101858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181257g00017 23 362 Glycoside Hydrolase AT3G07070 60.294 9.89e-149 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Stsc181257g00017 Pkinase 9.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181257g00017 - - gmx:100804000 560.451