Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3770 ATGGTGAAGGAGACCGAATACTATGACGTGCTAGGAGTCAGTCCCACAGCGACCGAGGCCGAGATTAAGAAAGCTTACTACATGAAGGCACGACAAGTACATCCAGATAAAAACCCAAATGACCCTCTTGCAGCACAAAATTTTCAGgttttgggagAGGCTTACCAAGTTTTGAGTGACCCATCTCAACGGCAAGCTTATGATGCACATGGAAAATCTGGAATCTCAACTGAAGCAATTATTGATCCAGCAGCAATCTTTGCCATGCTTTTTGGCAGTGAGCTTTTTGAAGAGTACATAGGCCACTTAGCCATGGCATCGATGGCATCGATGGATGTCTTTACTGAAGGGGAACAATTTGATGCTAAAAAGTTGCAAGAGAAAATGAGGGTTGttcagaaagagagagaagaaaggcTTGCAGAGATACTGAAAAATAGACTAAACCTATATGTCCAAGGAAACAAATGGGAATTTGTTAATCATGCAGAAGCTGAAGTATCCCGGCTATCCAATGCAGCTTATGGTGTTGATATGTTGAATACCATTGGCTACATATATGCAAGGCAGGCAGCAAAAGAGCTAGGGAAGAAAGCTATTTATTTAGGTGTGCCATTCATTGCTGAGTGGTTTAGAAACAAAGGGCACTTCATCAAATCCCAAGTTACAGCAGCTACAGGGGCAATTGCTCTGATCCAGCTGCAGGAAGATATGAAGAAGCAGCTCAGTGCAGAAGGGAACTATACCGAAGAAGAGCTTGAAGAATACATGCAATCCCACAAGAAATTAATGATTGACTCTTTGTGGAAGCTTAATGTAGCTGACATTGAGGCCACTCTTTCCCGTGTTTGTCAAATGGTTCTTCAAGACAATAGTGCTAAAAAAGAAGAACTTCGTGCTCGAGCTAAAGGGTTGAAAACTCTAGGTAAAATCTTTCAGGTAAGAGTTAAGTCAGCCGATGGAAATGAGAACGAAAGCATACAAAACAAAGAGGCAATGCATAAGTTGAATGGAAGTGAACCAAGCAATGATGCTTGTTCTCCCAGTACATCGCAAAAATCTACTAGTCCCGATTTTTCATCTCACTCTGTATCTGTGACTCAGAGTCCCTACGTGGAGGCTCCCCACTTTGCAGGCATGCATTTGGACTATAACTTCCCTAGGCCAACCGCCCCCCCGGGCGCCCAGAGACCTCCGACCAACAGGGATTGA 1212 0.4241 MVKETEYYDVLGVSPTATEAEIKKAYYMKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSDPSQRQAYDAHGKSGISTEAIIDPAAIFAMLFGSELFEEYIGHLAMASMASMDVFTEGEQFDAKKLQEKMRVVQKEREERLAEILKNRLNLYVQGNKWEFVNHAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNSAKKEELRARAKGLKTLGKIFQVRVKSADGNENESIQNKEAMHKLNGSEPSNDACSPSTSQKSTSPDFSSHSVSVTQSPYVEAPHFAGMHLDYNFPRPTAPPGAQRPPTNRD 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3770 403 CDD DnaJ 6 60 IPR001623 -
Sto9g3770 403 MobiDBLite consensus disorder prediction 335 367 - -
Sto9g3770 403 SMART dnaj_3 5 63 IPR001623 -
Sto9g3770 403 Coils Coil 122 142 - -
Sto9g3770 403 SUPERFAMILY Chaperone J-domain 2 102 IPR036869 -
Sto9g3770 403 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Sto9g3770 403 Gene3D DnaJ domain 1 84 IPR036869 -
Sto9g3770 403 PRINTS DnaJ domain signature 8 26 IPR001623 -
Sto9g3770 403 PRINTS DnaJ domain signature 26 41 IPR001623 -
Sto9g3770 403 PRINTS DnaJ domain signature 43 63 IPR001623 -
Sto9g3770 403 PRINTS DnaJ domain signature 63 82 IPR001623 -
Sto9g3770 403 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Sto9g3770 403 Pfam X-domain of DnaJ-containing 133 327 IPR026894 -
Sto9g3770 403 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 373 - -
Sto9g3770 403 Pfam DnaJ domain 6 68 IPR001623 -
Sto9g3770 403 MobiDBLite consensus disorder prediction 381 403 - -
Sto9g3770 403 PANTHER CHAPERONE PROTEIN DNAJ 10-LIKE ISOFORM X1 1 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3770 Sto-Chr9 35778951 35795711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3770 7 68 Miscellaneous Gene Families AT1G16680 45.312 9.83e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3770 - - cam:101512264 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3770 9 35778951 35795711 Sto9g3770 9 35778951 35795711 ECH