Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3746 ATGGCAGGACCCAATATGGATCAGTTTGAGGCATATTTCAGGAGAGCAGATTTAGACGGGGATGGCAGAATCAGTGGAGCTGAAGCTGTCTCTTTCTTCCAAGGATCCAACTTGCCAAAACACGTTCTTGCTCAGATATGGATGCATGCTGATCAGGCCAAAACTGGATTCCTTGGGCGGACAGAGTTTTACAATGCTCTAAAATTAGTTACTGTGGCACAGAGTAAACGAGAGTTAACGCCTGATATTGTTAAGGCAGCACTATATGGTCCTGCTGCTGCTAAAATCCCTGCACCTCAGATCAATCTTTCTGTTCTACCTCCACCACTACCAAATTCAGTGGCTTCTGCTCCTGCTTCACAGACAGGTGCAAGTAGACCGGTATCATCTCAAAGTTTTTCATATACAGGACAGGGATTATCAGGTCAAATTGTAAACCAGATGTACACTCCTTCCCCACAAAATCAAACCATGAGACCATCTCAACCCATGCCTGCCAGTAGTGCTTCCCGTCCACAACAGGGTATTGCTGGTCCAGATCCTTCTAGAGGGGTTGGTATGGCGGGTCACAATCTCTCAAACCCAAGCATGTTGACTGATTGGAATAGTGGAAGGCCTAGTACAATTACTATGAGGCCCGGGGGGATCACTCCGTCTGTGCCCTTATCCACATCAACATCACAAGCTCCAGTCTCATCGATTTCCCAGCCAACAAATATTAGCAGTAAAACATTATCAGTTTCTGGTAATGGCTTTTCTCCCAATTCAGCTTTTGGAAATGATTTATTCTCTGCTGCCTCATCCATACCAAAACAAGAACCTGCTGGACAGAACTATTCTGCTAGCAGTGCACCTGCCTCATCAGCCATTGTTCCAATTTCAAGTGGTGCCCAACCTGCAAGTAAGCAAAATGCACTTGATTCACTGCAGATTATGAATGGTCAGTTTCAACGCACGCATCCATCAGCAAACCCAAACCAACAGATTTCAGCCGCAGCTTCTTCTTCACTTACATCATCTGGAACATCAGCTGGACCTGGAAATACTAATTCTGACAGTTCACTGCTTTCTTGGCCAAAAATGAAACCTTCTGATGTGCAGAAGTATACAAAAGTGTTTATGGAAGTAGACACTGACAGGGATGGAAAAATCACTGGGGAGCAGGCACGCAGTCTATTTTTAAGTTGGAGATTACCTATAGAGGTCTTAAAGAAGGTGTGGGACTTATCTGATCAGGATAATGACAGTATGCTTTCTTTGAAGGAGTTTTGCTTTGCTCTCTATTTGATGGAGCGACATAGAGAGGGTCGCTCGCTTCCACCATCTCTTCCAAGTAATGTCTTATATGATGAGACACTGCTGTCTATGACAGGTCATCCAAAAATTTCGTATGGAAATGCAGCTTGGGGTGCAGGTCCACAGCAAACAGCGATGCCAGGTGCCCGGCCGGTGGCACCAGCAACTGTTTCAAGGCCGCCTGTCCAAGGAACATCTTCCCGAGTTGATGATCGCACAATGCAACCCAATCAACAAAAGTCAGCTGCTCCTGTCTTGGAGGATTCGTTTTTGAACCAAGTCAATAATGGGAACCAGGATAAATTAAACTCAAAGCCCAATGAGGCAACAACTGcagcaaaaaagGTTGAAGTAACAGAGAATGTGATCTTGGATTCAAAAGAGAAGCTTGAGTTTTACCGCAACAAAATGCAGGAACTGGTTCTTTATAAAAGCAGATGTGATAATCGGCTAAATGAGATCACAGAAAGGGCATCTGCAGATAAGCGTGAGGCAGAGTCACTGGCCAAGAAATATGAGGAGAAGTACAAGCAAGTAGCAGAAATTGCATCCAAATTGACTATTGAAGAGGCTAAATTCCGGGATATACAGGAAAGGAAGACGGAGTTGCAGCAAGCCATTATCAAAATGGAACAGGGAGGAAGCTCAGATGGTATCCTTCAGGTCCGTGCTGATCGTGTACAGTCAGATCTTGAGGAGTTACTGAGGGCTTTAGCTGAAAGATGCAAGAAACACGGGATACATGTAAAATCAAATGCAATGGTTGAACTTCCTATTGGTTGGCAACCTGGAATTCCAGAGGGTGCAGCTGTGTGGGATGAAGATTGGGATAAATTTGAAGATGAAGGATTTGCCAATGATCTCACTGTTGATATGAAAAATGTATCTGCAAAACCAAAACCTGCGATCAATAGTGAACATGATTCCGCTGATGATAATTCAATTCATGGTTCACCCGTACATGCaaatgaaaagaaaggaaacTTTACAAGTAATGGTGATTATGCATTTGAGGGTGAATCTGCATACACGCACAATGAAGATGACATAGCAAGAAGCTCTCATGATAGTCCCACTGGAGGGACCATTATAGGCAGCCCCCCTCAAGAATTTTCAAGTGTTCATTTTGGAAAAAGTTCTGAAGCAGATCCAGAGACAAATAGAAGTTTTGATGAATCGACCTGGGGTGTCTTTGACAATAATGATGATGTGGATTCGGTGTGGGGTTTTAATACAGCTAATGCCAAGGTAACTCCTGAATCTGGCCTGGATAAGCAGAGGGACTTCTTTAAATCTGGTGATTTTGGTATAAACCCAGTTAGGACAGGATCTACTCATACAGATGGCACATTTCAGACGAGGAGCCCATTTACTTTCGATGATTCCGTTCCTGGAACTCCACTATCCAAGTTTGGTAACTCTCCACGGTTCAGTGAGGCAGGAGATCACTTCTTTGACAATATGTCGAGGTTTGATTCCTTCAGCATCCATGACAGCGGTTATTCTCCACAACCTGAGAGGCTGACGAGATTTGATTCCATAAGTAGCAGCCGAGACTTTGGCTACAATAATGAGAAGCTCACAAGGTTTGATTCCATGAGTAGCAGCAAAGATTTTGGCTATACTTCAGAGAGACTGACAAGGTTCGATTCCATGAATAGCAGCAAAGATTTCGGCTTCAGTCATGACAGACATACCAGGTTTGACTCAATAAGTAGCACCAAGGACTTCGGCCACAGTGGTGCATTCTCTTTTGACGACTCTGATCCATTTGGATCTTCTGGCCCATTTAAGGTTTCTTCAGAGAGCCAAACTCCAAAGAAGGGTTCGGATAGTTGGAGTGCGTTCTAG 3147 0.4379 MAGPNMDQFEAYFRRADLDGDGRISGAEAVSFFQGSNLPKHVLAQIWMHADQAKTGFLGRTEFYNALKLVTVAQSKRELTPDIVKAALYGPAAAKIPAPQINLSVLPPPLPNSVASAPASQTGASRPVSSQSFSYTGQGLSGQIVNQMYTPSPQNQTMRPSQPMPASSASRPQQGIAGPDPSRGVGMAGHNLSNPSMLTDWNSGRPSTITMRPGGITPSVPLSTSTSQAPVSSISQPTNISSKTLSVSGNGFSPNSAFGNDLFSAASSIPKQEPAGQNYSASSAPASSAIVPISSGAQPASKQNALDSLQIMNGQFQRTHPSANPNQQISAAASSSLTSSGTSAGPGNTNSDSSLLSWPKMKPSDVQKYTKVFMEVDTDRDGKITGEQARSLFLSWRLPIEVLKKVWDLSDQDNDSMLSLKEFCFALYLMERHREGRSLPPSLPSNVLYDETLLSMTGHPKISYGNAAWGAGPQQTAMPGARPVAPATVSRPPVQGTSSRVDDRTMQPNQQKSAAPVLEDSFLNQVNNGNQDKLNSKPNEATTAAKKVEVTENVILDSKEKLEFYRNKMQELVLYKSRCDNRLNEITERASADKREAESLAKKYEEKYKQVAEIASKLTIEEAKFRDIQERKTELQQAIIKMEQGGSSDGILQVRADRVQSDLEELLRALAERCKKHGIHVKSNAMVELPIGWQPGIPEGAAVWDEDWDKFEDEGFANDLTVDMKNVSAKPKPAINSEHDSADDNSIHGSPVHANEKKGNFTSNGDYAFEGESAYTHNEDDIARSSHDSPTGGTIIGSPPQEFSSVHFGKSSEADPETNRSFDESTWGVFDNNDDVDSVWGFNTANAKVTPESGLDKQRDFFKSGDFGINPVRTGSTHTDGTFQTRSPFTFDDSVPGTPLSKFGNSPRFSEAGDHFFDNMSRFDSFSIHDSGYSPQPERLTRFDSISSSRDFGYNNEKLTRFDSMSSSKDFGYTSERLTRFDSMNSSKDFGFSHDRHTRFDSISSTKDFGHSGAFSFDDSDPFGSSGPFKVSSESQTPKKGSDSWSAF 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3746 1048 MobiDBLite consensus disorder prediction 317 360 - -
Sto9g3746 1048 SMART eh_3 358 453 IPR000261 GO:0005515
Sto9g3746 1048 SMART eh_3 1 93 IPR000261 GO:0005515
Sto9g3746 1048 Pfam Cytoskeletal-regulatory complex EF hand 359 430 IPR000261 GO:0005515
Sto9g3746 1048 MobiDBLite consensus disorder prediction 787 812 - -
Sto9g3746 1048 ProSiteProfiles EH domain profile. 365 448 IPR000261 GO:0005515
Sto9g3746 1048 MobiDBLite consensus disorder prediction 781 827 - -
Sto9g3746 1048 MobiDBLite consensus disorder prediction 192 239 - -
Sto9g3746 1048 MobiDBLite consensus disorder prediction 473 519 - -
Sto9g3746 1048 Coils Coil 583 638 - -
Sto9g3746 1048 Gene3D - 4 95 - -
Sto9g3746 1048 CDD EH 369 435 IPR000261 GO:0005515
Sto9g3746 1048 PANTHER EH DOMAIN 1 955 - -
Sto9g3746 1048 PANTHER EH DOMAIN 977 1048 - -
Sto9g3746 1048 MobiDBLite consensus disorder prediction 873 896 - -
Sto9g3746 1048 MobiDBLite consensus disorder prediction 1026 1048 - -
Sto9g3746 1048 MobiDBLite consensus disorder prediction 491 519 - -
Sto9g3746 1048 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
Sto9g3746 1048 MobiDBLite consensus disorder prediction 731 765 - -
Sto9g3746 1048 SMART efh_1 402 430 IPR002048 GO:0005509
Sto9g3746 1048 SMART efh_1 368 396 IPR002048 GO:0005509
Sto9g3746 1048 SMART efh_1 8 36 IPR002048 GO:0005509
Sto9g3746 1048 SMART efh_1 42 70 IPR002048 GO:0005509
Sto9g3746 1048 CDD EH 9 75 IPR000261 GO:0005515
Sto9g3746 1048 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 955 - -
Sto9g3746 1048 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 977 1048 - -
Sto9g3746 1048 Pfam EF hand 10 26 IPR002048 GO:0005509
Sto9g3746 1048 MobiDBLite consensus disorder prediction 115 175 - -
Sto9g3746 1048 SUPERFAMILY EF-hand 357 447 IPR011992 -
Sto9g3746 1048 Gene3D - 359 448 - -
Sto9g3746 1048 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Sto9g3746 1048 ProSiteProfiles EH domain profile. 5 95 IPR000261 GO:0005515
Sto9g3746 1048 SUPERFAMILY EF-hand 5 88 IPR011992 -
Sto9g3746 1048 MobiDBLite consensus disorder prediction 114 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3746 Sto-Chr9 35614611 35623678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3746 1 1048 EF-hand Containing Proteins AT1G20760 52.030 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3746 K12472 - gmx:100818930 1449.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3746 9 35614611 35623678 Sto9g3746 9 35614611 35623678 ECH