Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3744 ATGAGCCGGAGCTTGGGTATACCGGTGAAGCTATTACACGAGGCTTCTGGTCACGTGGTCACCGTGGAGCTGAAGAGTGGAGAACTCTATCGAGGAAGTATGATCGAGTGCGAAGACAACTGGAATTGTCAACTCGAGAACATTACCTATACTGCCAAGGATGGAAAAACATCACAACTTGAACATGTGTTTATTCGAGGCAGCAAAGTCAGTGTGAATTTTAACAGGTTTATGGTCATACCTGACATGCTGAAGAATGCTCCAATGTTTAAGCGTTTGGATGCCAGAATTAAGGGCAAGGGTGCGTCACTTGGAGTTGGTAGGGGTAGAGCAGTTGCAATGCGAGCAAAgGCTCAAGCTGCTGGCCGTGGCGTAGCACCTGGTAAGGGCATTGTACCGCCTGTGCGGAGGTGA 414 0.4879 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKTSQLEHVFIRGSKVSVNFNRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQAAGRGVAPGKGIVPPVRR 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3744 137 SUPERFAMILY Sm-like ribonucleoproteins 8 128 IPR010920 -
Sto9g3744 137 Pfam LSM domain 11 70 IPR001163 -
Sto9g3744 137 Gene3D - 3 91 - -
Sto9g3744 137 SMART Sm3 10 80 IPR001163 -
Sto9g3744 137 CDD Sm_D3 8 82 IPR034099 GO:0000387|GO:0005681
Sto9g3744 137 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3 1 133 - -
Sto9g3744 137 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 133 IPR027141 GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3744 Sto-Chr9 35604178 35606156 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3744 K11088 - jre:109002935 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3744 9 35604178 35606156 Sto9g3744 9 35604178 35606156 ECH