Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3715 ATGCATCAAGGAGATTACAGCTCTTCTCCTTATTATCAATTCTCtaaccctaatcctcCTGATTCACTCCCCAACCAGTACGCCTCTGCGCCTCCGTTCACCCCCGATTACACGTCTTACGCCTCTACTTATCCTCCGTACTCTCAAAATCCCGATCCTATATCAGTCCCTCCCACTGCCCCATTGTACCCTCCAACATCCAATCCCAATTTGCACTCTTTTAGTTCTCCTCCACAACCCTCTTCTTTTCCTCCGTTTGAATCCCATATTCCCTACCAACCACCGTCACAGCAACAATGTCAATATCCATCCTATGATCAGCATCAAACGACCCCAAGTTATGCCCCTCCTTCATCCGCCATTCCTTCGAACCCAAGTCCCAATTCTTCATACCCATCCTTGTACTCGGCTTCATACACTCATCCTGGACCTTCTGTTCCTCCGACATACGAAAGTCCTTATGACAATTCCGTGAAATTTGACTATGGCGGTGCTTATATCGATGACAAATATGGAAGTTTTAATCGGAGCCGGCCCGATTTGGAGCCGGATGTTCGTGATGAAATTTATGGAGATGGTGCTGGTGTGTATCCCTATGAAGGAGGCAAGATAGAACCATATGGAGCACGGGGTACAGCTCCTAAGTCGTCAACCTGGTCTGGATTTGATGATTATGGAAGGTCTATTAGTTTTCCTTCGCCGAAAGAATCCTCTCTTACAACCAAGGTTGTGAAAGCAGTGCCGAAGACTGATGCCCGTGATGATGTTAGAAGCGGGGTACAAAAATTTCGCGTCAAGCTATTGGCAGAAAGTGGTGGTCAGAGCACTATGGATGTTCTCTGTCAGATTGGTTTGGATGGAATTCGAATGCTGGATCCAAGTACAAGCCGGACGTTGAGAATTTATTCTCTTGAGAACATTACAAGATGTGAAAAATTCGATTCATCCACCTTTGCATTTTGGTCCAAGAGTCCTGTTGACATTGAGCCAAGACGAATCAGATTGCAATCCAATAGTTATACTACCAACACACTATTGGATACTGTGACTGCTGCAACCATACAGTTCAAGGAAATGGGTGGAAGTAGAAGGCCTACAGAATCATTGAAAACGAATGAACAGCCtacagaaaagaagaaaggccTTGTTGATTGGATGAATTTGATTAAACCTGCCAATGAAGAGAAAGATCATTGGGTCCCAGATGAAGCAGTTTCAAAATGTACAGCATGTGGCACTGATTTCGGGGCTTTTAATCGCAGGCACCACTGTAGAAACTGTGGGGATATTTTCTGTGACAAATGTACACATGGTAGAATTGCTCTAACTGCTGATGAGAATGCTCAGCCAGTACGAGTTTGTGACCGATGCATGGCAGAAGTGACTCAGAGGCTCAGTAATGCTAAAGAGGCAGCTAGCAAGCCTGTTTTGCAAAGTCATGAAGATCTCGCTAGGAAACTTCAGGAGGAACTAGAGAGGAATCGAAGAACATCAGGCTCCAAGTCTGATGGATCTGGAAGGCGGATGAAAGAAGTTGAGTGCCCTACTTGCACCGTCCATCTGCAGGTCCAAGTGCCTAGCTCAGGTTCGGAGACAATTGAGTGTGGGGTTTGCCAGCACCCATTTCTCGTGAGTGCTCATTGA 1644 0.4489 MHQGDYSSSPYYQFSNPNPPDSLPNQYASAPPFTPDYTSYASTYPPYSQNPDPISVPPTAPLYPPTSNPNLHSFSSPPQPSSFPPFESHIPYQPPSQQQCQYPSYDQHQTTPSYAPPSSAIPSNPSPNSSYPSLYSASYTHPGPSVPPTYESPYDNSVKFDYGGAYIDDKYGSFNRSRPDLEPDVRDEIYGDGAGVYPYEGGKIEPYGARGTAPKSSTWSGFDDYGRSISFPSPKESSLTTKVVKAVPKTDARDDVRSGVQKFRVKLLAESGGQSTMDVLCQIGLDGIRMLDPSTSRTLRIYSLENITRCEKFDSSTFAFWSKSPVDIEPRRIRLQSNSYTTNTLLDTVTAATIQFKEMGGSRRPTESLKTNEQPTEKKKGLVDWMNLIKPANEEKDHWVPDEAVSKCTACGTDFGAFNRRHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDRCMAEVTQRLSNAKEAASKPVLQSHEDLARKLQEELERNRRTSGSKSDGSGRRMKEVECPTCTVHLQVQVPSSGSETIECGVCQHPFLVSAH 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3715 547 MobiDBLite consensus disorder prediction 1 136 - -
Sto9g3715 547 SUPERFAMILY FYVE/PHD zinc finger 397 469 IPR011011 -
Sto9g3715 547 MobiDBLite consensus disorder prediction 50 65 - -
Sto9g3715 547 PANTHER PROTEIN FREE1 1 547 - -
Sto9g3715 547 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 389 467 IPR013083 -
Sto9g3715 547 MobiDBLite consensus disorder prediction 92 117 - -
Sto9g3715 547 PANTHER PROTEIN FREE1 1 547 IPR045893 GO:0036258|GO:0043130
Sto9g3715 547 MobiDBLite consensus disorder prediction 1 49 - -
Sto9g3715 547 SMART fyve_4 394 463 IPR000306 GO:0046872
Sto9g3715 547 Coils Coil 477 497 - -
Sto9g3715 547 Pfam FYVE zinc finger 398 462 IPR000306 GO:0046872
Sto9g3715 547 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 402 462 IPR017455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3715 Sto-Chr9 35443187 35447453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3715 390 475 EF-hand Containing Proteins AT3G14270 36.082 2.27e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3715 - - vvi:100259195 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3715 9 35443187 35447453 Sto9g3715 9 35443187 35447453 ECH