Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3694 ATGGGAGTCCCAGCTTTCTATAAGTGGTTGGCGGAGAAGTATCCATTAGTTGTGGTGGACGTGATCGAGGAAGAATCAGTTGTTATTGACGGCATCGAAATTCCGGTGGACACCAGTAAGAAGAACCCTAACGGCCTCGAATATGATAACCTCTACCTCGACATGAACGGGATCATTCACCCCTGCTTCCACCCCGAAGATAGGCCAACTCCGACCACTTTTGATGAAGTGTTCCAGTGCATGTTTGACTATATTGACAGGTTATTTGTCATGGTGCGGCCTCGGAAGCTTCTATTTATGGCTATTGATGGTGTTGCCCCAAGGGCTAAAATGAACCAACAGCGGTCTAGACGATTTAGAGCAGCAAAAGATGCAGCAGAAGCGATTAAGTTGGGAGATCCAGGCTGGAAAGAGAGGTATTACGAGGAAAAATTTCCTGCCAAAACGCCTGAGGAACTTGAATTGATTCGGAAAGATGTTTATACAGAAGGCCTATGTTGGGTTATGCACTATTATTATGAAGGAGTTTGTTCTTGGCAGTGgTTTTATCCTTATCATTATGCCCCATTTGCATCTGATATCAAGGGCCTTGATGAACTTAGCATAAACTTTGAGCTGGGAACCCCGTTCAAACCATTTGACCAGCTTCTAGGGGTGTTTCCTGCAGCAAGCTCTCATGCACTTCCCCAGCCGTATAGGAAACTGATGACAGATCCAAACTCACCAATTATTGATTTTTACCCTATTGACTTTGAAGTGGACATGAATGGCAAACGATATGCTTGGCAGGGCATTGCAAAATTGCCTTTTATTGATGAAGCACGCCTTCTTGCAGAAGTTCAAAAAATTGAACACTTATTATCGgcaGAGGAAACACGACGAAACAGTATTATGTTCGAGTTGCTTTTTGTGAATTCTTGTCATCCTCTCTCTGCATGCATAAGCACACTTGACAACAAATGTAGAAACATGTCAGACACGGAGCGTGCTCAGGTTAAGGAACAAATCAATCCTAAAGAGAGTGGTGGAATGAATGGTTATATATCATTATGTGGTGGAGAACCTTGCCCGCCTATTTTTAGGTCACCTGTAGCAGGCATGGAAGATATTATGGACAACCAAGTCGTGTAA 1131 0.4332 MGVPAFYKWLAEKYPLVVVDVIEEESVVIDGIEIPVDTSKKNPNGLEYDNLYLDMNGIIHPCFHPEDRPTPTTFDEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRSRRFRAAKDAAEAIKLGDPGWKERYYEEKFPAKTPEELELIRKDVYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDIKGLDELSINFELGTPFKPFDQLLGVFPAASSHALPQPYRKLMTDPNSPIIDFYPIDFEVDMNGKRYAWQGIAKLPFIDEARLLAEVQKIEHLLSAEETRRNSIMFELLFVNSCHPLSACISTLDNKCRNMSDTERAQVKEQINPKESGGMNGYISLCGGEPCPPIFRSPVAGMEDIMDNQVV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3694 376 Pfam Xrn1 helical domain 110 376 IPR041412 -
Sto9g3694 376 Gene3D - 105 297 - -
Sto9g3694 376 PANTHER 5'->3' EXORIBONUCLEASE 1 128 IPR027073 -
Sto9g3694 376 PANTHER 5'->3' EXORIBONUCLEASE 128 376 IPR027073 -
Sto9g3694 376 Pfam XRN 5'-3' exonuclease N-terminus 1 129 IPR004859 GO:0003676|GO:0004527
Sto9g3694 376 PANTHER 5'-3' EXORIBONUCLEASE 1 128 - -
Sto9g3694 376 PANTHER 5'-3' EXORIBONUCLEASE 128 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3694 Sto-Chr9 35288042 35298351 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3694 - K12619 gmx:100785683 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3694 9 35288042 35298351 Sto9g3694 9 35288042 35298351 ECH