Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3688 ATGGAAGGATCATTCGGTGCAAGAGGTGAAGTGAAGAAATTAGTAGCTAGTGATAATGCTGATATCTGGCGCAAGACATATGCAGCATCATATCGATCTCATAATGCAAAGCTTATCCttattatgattttaaatttattatatatggaGGCTCTAACATGCAGATGCACTGATGGTACTGTGTGGTACAGTAGAGAGGGATTTGGAAAATGCTGCAAACTCCGATGCATTGTGAGGGTGTGCCAAATGCTGAGACGGTGGCGCAACAAGGCACGCATGTCACCCTCGGATGTGCCGTCGGGACACGTGGCGGTGTGCGTGGGGAGCAGGTCCAGGAGATATGTGGTGAAGGCCACCTATCTGAACCACCCCTTCTTCTGGAAACTGCTGAATGGGGCGGAGGAAGAGTACGGATTTTGTAACAATGGGCCCCTCACCATTCCATGCGACGAAGCACTCTTTGAAGAGGTTTTATGCCgcgtttcttcttcttcaacatcCCCAAACCAAAAGCATGCGCAAAAGAATTGCCATCTCCACCTCTGGCAAGATTGTCGACCACTTCTTCAAGCCACCCCCTACTGA 585 0.4598 MEGSFGARGEVKKLVASDNADIWRKTYAASYRSHNAKLILIMILNLLYMEALTCRCTDGTVWYSREGFGKCCKLRCIVRVCQMLRRWRNKARMSPSDVPSGHVAVCVGSRSRRYVVKATYLNHPFFWKLLNGAEEEYGFCNNGPLTIPCDEALFEEVLCRVSSSSTSPNQKHAQKNCHLHLWQDCRPLLQATPY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3688 194 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 69 172 IPR003676 GO:0009733
Sto9g3688 194 Pfam Auxin responsive protein 90 160 IPR003676 GO:0009733
Sto9g3688 194 PANTHER SMALL AUXIN-UP RNA-RELATED 69 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3688 Sto-Chr9 35251278 35255805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3688 68 189 Calmodulin-binding Proteins AT4G34750 47.518 1.02e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3688 K14488 - csv:101216342 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3688 9 35251278 35255805 Sto9g3688 9 35251278 35255805 ECH