Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3681 ATGTCTGCAGTCGAAGCGGAGAAGAATGTTGAAGAAGAGAAGGAGGTGGTGAAAGGAGGAGAGCTCTTGTTCTGCGGTGGTACGTCTTGGGATATCATTGGTCGTCGCAAAGGTCCTGTCGAAGGCAACTTGGTCTCTCCAACTCGGCTTCGCCCTCTCGTCGGGATTGATATTCGATATGTTGCCTCTGGTTGCGCGTCTTGTCATTGTGTGGCATTGGATAAGGGGCAACTTGGTCATGGAGATACCATTCAGCGTGATAGGCCTACTGTGGTGTCTGAACTTTCGAAATACAAAATCATTAAAGCTGGAGCAGGGAGGAACCACACTGTGGTTGCTACGGAGGATGGACATTCCCTTGCCTTTGGTTGGAACAAGCATGGACAACTAGGTTCAGGTTCTATAAAAAATGAGATTGAGTCATCTCCTGTTCGCTGTCTAGTGTCAGAAGTCAAATATACTACTTGTGGTGGTGATTTCACTGTTTGGTTGTCTTCCATTGAAGGAGCTTCTATACTTACTGCAGGGCTCCCACAGTATGGGCAGCTTGGACACGGAACAGATAATGAGTACAATTCCAAAGACAGCTCTGTGAAGTTGGTTTATGAACCCCAACCACGTCCACGGGCAATTGCTACACTTGCTGGGGAAACAATTGTGAAAGTGGCTTGTGGAACAAATCACACAGTGGCGGTGGATAAGAATGGCTTCGTTTACACGTGGGGTTTTGGTGGTTATGGAAGGCTAGGACATAGGGAGCAGAAGGATGAGTGGGTCCCTCGTCGTGTTGATGTTTTCCAGAACAGAAATGTTCTTCCTCCCGATGCTGTGATTTCAGCTGGTTCTGTGAACTCTGCATGTACTGCAGGTGGAGGGCAATTATATATCTGGGGAAAAATAAAGACCACAGGTGATGACTGGATGTATCCTAAGCCTCTAATGGATTTAAGTGGCTGGAACTTACGATGCATGGATTCAGGCTATTTGCACCATTTTGTTGGGGCTGATTCTTCATGCATAAGTTGGGGCCATGCTCAGCACGGAGAGCTGGGATATGGACCTAATGGACAGAAGTCTTCAGCAGTACCAAAAAAGGTGGATATTCTTGAGGGCATGCATGTCATTAGTGTTGCTTGTGGTATGGGTCATTCCATGGTCATTGTTGATAGAACAAATGTTGGTGAACGACTTGACCAGTTCCTATCATCTCTTGATTACTTTACTCTTGATATATATGATGGCAAAGCTTTTGGCGAACAAGTGAATGAAGAACCTGTAAAGAAAACTACTGTATCTAAGCAGACTGCAAAAAAGGGTGCAAAAGGTGCTGACAAttcaaagaagaggaagaaatcaAAAGAATCCTCCGACTCAGAGCAGGAAGAAGATGGTGAAGAAAGTGATGACAGTGAGGAGCAAGTAAATGGTGTGGCCAAGGACAAAAGGCAACGCGGTAAAAATCAATCTGGTAAAACAAAAGCCAAAGCCAAAGCCAAAACTAAAGCAAAAGCAAGAGGTTCTGGCACTGAGCGTAATCAGCCTCCAGTAAAAACGGGTAAGAGAGGAAGACCCCGTAAATCATGA 1584 0.4501 MSAVEAEKNVEEEKEVVKGGELLFCGGTSWDIIGRRKGPVEGNLVSPTRLRPLVGIDIRYVASGCASCHCVALDKGQLGHGDTIQRDRPTVVSELSKYKIIKAGAGRNHTVVATEDGHSLAFGWNKHGQLGSGSIKNEIESSPVRCLVSEVKYTTCGGDFTVWLSSIEGASILTAGLPQYGQLGHGTDNEYNSKDSSVKLVYEPQPRPRAIATLAGETIVKVACGTNHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWVPRRVDVFQNRNVLPPDAVISAGSVNSACTAGGGQLYIWGKIKTTGDDWMYPKPLMDLSGWNLRCMDSGYLHHFVGADSSCISWGHAQHGELGYGPNGQKSSAVPKKVDILEGMHVISVACGMGHSMVIVDRTNVGERLDQFLSSLDYFTLDIYDGKAFGEQVNEEPVKKTTVSKQTAKKGAKGADNSKKRKKSKESSDSEQEEDGEESDDSEEQVNGVAKDKRQRGKNQSGKTKAKAKAKTKAKARGSGTERNQPPVKTGKRGRPRKS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3681 527 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 337 390 IPR000408 -
Sto9g3681 527 SUPERFAMILY RCC1/BLIP-II 18 390 IPR009091 -
Sto9g3681 527 MobiDBLite consensus disorder prediction 472 487 - -
Sto9g3681 527 Pfam Regulator of chromosome condensation (RCC1) repeat 341 387 IPR000408 -
Sto9g3681 527 Pfam Regulator of chromosome condensation (RCC1) repeat 74 112 IPR000408 -
Sto9g3681 527 Pfam Regulator of chromosome condensation (RCC1) repeat 173 232 IPR000408 -
Sto9g3681 527 Pfam Regulator of chromosome condensation (RCC1) repeat 116 162 IPR000408 -
Sto9g3681 527 Pfam Regulator of chromosome condensation (RCC1) repeat 235 273 IPR000408 -
Sto9g3681 527 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 170 235 IPR000408 -
Sto9g3681 527 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 117 167 IPR000408 -
Sto9g3681 527 Gene3D - 199 394 IPR009091 -
Sto9g3681 527 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 377 387 IPR000408 -
Sto9g3681 527 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 222 232 IPR000408 -
Sto9g3681 527 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 236 291 IPR000408 -
Sto9g3681 527 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 74 116 IPR000408 -
Sto9g3681 527 MobiDBLite consensus disorder prediction 488 502 - -
Sto9g3681 527 MobiDBLite consensus disorder prediction 424 527 - -
Sto9g3681 527 Gene3D - 4 198 IPR009091 -
Sto9g3681 527 PANTHER PROTEIN RCC2 5 515 IPR028641 -
Sto9g3681 527 PRINTS Chromosome condensation regulator RCC1 signature 100 113 IPR000408 -
Sto9g3681 527 PRINTS Chromosome condensation regulator RCC1 signature 119 135 IPR000408 -
Sto9g3681 527 PRINTS Chromosome condensation regulator RCC1 signature 222 238 IPR000408 -
Sto9g3681 527 PRINTS Chromosome condensation regulator RCC1 signature 238 252 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3681 Sto-Chr9 35200596 35206971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3681 - - gmx:100819842 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3681 9 35200596 35206971 Sto9g3681 9 35200596 35206971 ECH