Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3662 atggCCGAAGAAGGACAAGTCATCGGTTGCCACACTGTCGAGTCCTGGAAAGAGCAGCTTAAGAAGGGAGAAGAATCCAAGAAACTGATTGTAGTGGATTTTACTGCTTCTTGGTGTGGTCCATGCCGTTTCATTGCCCCAATTCTGGCAGAAATTGCTAAAAAGTTGCCCAATGTCATCTTTCTGAAGGTGGATGTGGATGAATTGAAGAGTGTTGCTCAGGAATGGGACATCGAGGCTATGCCTaccttcttgttcttgaaagaAGGAAAATTGGTGGATAAGGTCGTTGGTGCTAAGAAAGAGGAGCTGCAACTGACCATATCGAAGCATGCAGGTGTTGCTACTGCTTGA 354 0.4322 MAEEGQVIGCHTVESWKEQLKKGEESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPNVIFLKVDVDELKSVAQEWDIEAMPTFLFLKEGKLVDKVVGAKKEELQLTISKHAGVATA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3662 117 TIGRFAM thioredoxin: thioredoxin 24 111 IPR005746 GO:0015035
Sto9g3662 117 PANTHER THIOREDOXIN 1 116 - -
Sto9g3662 117 Gene3D Glutaredoxin 1 114 - -
Sto9g3662 117 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Sto9g3662 117 PANTHER THIOREDOXIN 1 116 - -
Sto9g3662 117 CDD TRX_family 14 103 - -
Sto9g3662 117 PRINTS Thioredoxin family signature 30 38 - -
Sto9g3662 117 PRINTS Thioredoxin family signature 38 47 - -
Sto9g3662 117 PRINTS Thioredoxin family signature 77 88 - -
Sto9g3662 117 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Sto9g3662 117 Pfam Thioredoxin 10 108 IPR013766 -
Sto9g3662 117 SUPERFAMILY Thioredoxin-like 6 111 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3662 Sto-Chr9 35081259 35082763 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3662 K03671 - gmx:100499879 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3662 9 35081259 35082763 Sto9g3662 9 35081259 35082763 ECH