Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3659 ATGATGTTGATTCGACGATTGCCGTCAATGGCAATTTCTATGAGCACAGAAATACCGTTCTGTTCCGGAGCTACAAGCCTTGTTCGCCTTCGGAACCAAATTCCCTTTCTTCGCTCGTCCTTCTTCTCCCCACgaaaatttgtttttctctCCTTCTGCACAGCCTCCGGTTCCCGCATTTCCGCCGGTGAAAACGACCAGATTCCTCAagaatcgacgaaaactGGTAAGCTGAAACCCGGTCTCTATCTGGTAGGAACACCTATCGGAAATCTTGAAGATATCACTTTCAGGGCTCTCCGCATATTAAAGTCAGCAGATGTGATACTTTCAGAAGACACTAGGCATTCTGGAAAGTTGCTTCAGTACTACAATATCAAAACACCCCTGATGAGTTATCATAAATTCAATGAAGCACAAAGGGAGCAAGTAGTGTTGAAGAGGTTGAAGCAGGGTGAGATAGTCGCACTAATAAGTGATGCTGGAACGCCAGGCATTAGTGATCCTGGTATGGAATTGGCCAAATTATGTGTTAATGAAAATATCCTTGTTGTTCCTATACCTGGGCCCTGTGCTTTGATATCAGCACTTTCTGTGTCGGGTTTGGCTACTGATGAATTTACATTTGTCGGTTTTCTTCCAAAACATTCTGGATCTAGAAGAAAGAGACTCATGGTTTCAGCTGATGAAGCAACGACACAAATATTTTATGTTCCTCCTCACAAGCTTTCTCAATTTCTCGAAGAAAGTTCTTCATCTTTTGGTGATGCAAGGCAATGTGTTATTGCTCGGGAAATGACGAAGCTACATGAAGAgTTTTGGCGTGGTACTATTGGTGAAGCCAAGAAAGCATTTTCATTGCACCAACCAAAGGGGGAACTTACCATATTGATTGAAGGACGCACAAATTCTAGAGTTGAACCTCCATCAGAAATTCAGCTTGAGCATGAATTGAGAGATTTGATTTTGCGGGGCGAGAGTCTTTCCACGgcTGTCAAGTTGGTAGCTGGTGGAACGTCAGTGAGTAGAAAAACTGTATATTCACTTGCATTAAGAAAATTTGGGAAGCAACTGGAAGTGGAAGACGAATCAAAGTAA 1098 0.4153 MMLIRRLPSMAISMSTEIPFCSGATSLVRLRNQIPFLRSSFFSPRKFVFLSFCTASGSRISAGENDQIPQESTKTGKLKPGLYLVGTPIGNLEDITFRALRILKSADVILSEDTRHSGKLLQYYNIKTPLMSYHKFNEAQREQVVLKRLKQGEIVALISDAGTPGISDPGMELAKLCVNENILVVPIPGPCALISALSVSGLATDEFTFVGFLPKHSGSRRKRLMVSADEATTQIFYVPPHKLSQFLEESSSSFGDARQCVIAREMTKLHEEFWRGTIGEAKKAFSLHQPKGELTILIEGRTNSRVEPPSEIQLEHELRDLILRGESLSTAVKLVAGGTSVSRKTVYSLALRKFGKQLEVEDESK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3659 365 Hamap Ribosomal RNA small subunit methyltransferase I [rsmI]. 81 300 IPR008189 GO:0008168
Sto9g3659 365 Gene3D - 76 189 IPR014777 GO:0008168
Sto9g3659 365 ProSitePatterns RsmI AdoMet-dependent methyltransferase protein family signature. 159 170 IPR018063 GO:0008168
Sto9g3659 365 Gene3D - 190 306 IPR014776 GO:0008168
Sto9g3659 365 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I 65 362 IPR008189 GO:0008168
Sto9g3659 365 Pfam Tetrapyrrole (Corrin/Porphyrin) Methylases 82 281 IPR000878 GO:0008168
Sto9g3659 365 CDD RsmI 83 299 IPR008189 GO:0008168
Sto9g3659 365 TIGRFAM TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 82 351 IPR008189 GO:0008168
Sto9g3659 365 SUPERFAMILY Tetrapyrrole methylase 80 298 IPR035996 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3659 K07056 - gmx:100819709 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3659 9 35060147 35063862 Sto9g3659 9 35060147 35063862 ECH