Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3654 ATGGGATCAGCTTGTTGCGTTGCTGCAAAGGATCATACTCTTCCAAACAGAACAGGAGTTGAAAGTTTGCATAGAAATGTTGTTTATTCACCATCATGGAGCTTTCGATGGGATAGTCGGGGTCGTGTTGCCGGTGAAACTGAGAATTATTCGTATCACACATCTCATGGAGTCAGCAGAAATATTAGCATGGAGTTAAAAGGGTCAGTAAGTTCTGAAAGAGGCAATTTATCTGATGGGGGAAGCACCCTGGAGAATTCTATTACTCCGATTTCTCTGAAGTCTCCGCTTCATGAGGCATTGGTTGCaaatccaatgactccatcttcTGATCTGTCTATGGCTAGCAATTATTCTACAGTGGTGAAGAATTTTGCATCACCAGAAATTACAGAATCTTCTGTACCAACAAATCTTTCATTTTCAATGCCTTTAGGTTTCTCAACACCTACTGCAGATCCTTCACCTAATCATAATTATCATCGTCTTCCAAACTCTACACCATCTAGATGGACTCATCATTCTCCCGGACACCAACTGTTGAGACAGATATCTGATAGTAGGATCCTGGGATTGAAATCACCAGACAACTCAATTTCGGAAGGAAGGACATCATTTGTTCTTTCCACTTGCAGCAACGACATGGCTGGATCCCAATGTGGATCATCAGATGGCTGGTCCATGCGCACCTTTTCTGAGCTAGTGGCTTCATCTCAGAGGGAAAGGTGGTCCTTTGATAGCGAGTACTTAGGTTCAGGTCGTCACAAGATAAATGGATCTAGTAGCAGGTTCTCATATTCACCTTCTATGGATCAACAGTCTTGTGGGGCTTGCTCAAAGCTCTTGGCTGAGAGATCCGCATGGAGTAACCAGAAATTTATTGCCAACAACGACCTCTCAGTTGTTGCTGTACTTGTGTGTGGTCATGTTTATCATGCGGAGTGCTTAGAGACTATGACATCAGAGACAGATAGGTATGATCCTGCTTGTCCAATTTGTATGGTTGGAGAGAAGCACTTGTCTAAGTTGGCGAGGAAGGGTCTGCGTGCTGAATTAGAGATGATGGCCAAAAACTACAGGATATCGAAAAATCGTGTAGTTGATAGCTATGTTGATGGTGGTTTTGACGTATTTGAGAGGCGAAAAGATATTGAATGCCAATGGGGAGGAAAAGCTTCTAAGATGGAGCCTAGCTCCAGTGCAAGGACCTCACTCGGGAAGCCTTTTTTGAAGCGCCACTTTTCACTTGGCTCCAAGTGGACCCGATCCTTTTCGGAGAATGATTCTGTCAGGAAGAAGGGCTTTTGGGCAAGATACCGTAAAGATTGA 1329 0.4319 MGSACCVAAKDHTLPNRTGVESLHRNVVYSPSWSFRWDSRGRVAGETENYSYHTSHGVSRNISMELKGSVSSERGNLSDGGSTLENSITPISLKSPLHEALVANPMTPSSDLSMASNYSTVVKNFASPEITESSVPTNLSFSMPLGFSTPTADPSPNHNYHRLPNSTPSRWTHHSPGHQLLRQISDSRILGLKSPDNSISEGRTSFVLSTCSNDMAGSQCGSSDGWSMRTFSELVASSQRERWSFDSEYLGSGRHKINGSSSRFSYSPSMDQQSCGACSKLLAERSAWSNQKFIANNDLSVVAVLVCGHVYHAECLETMTSETDRYDPACPICMVGEKHLSKLARKGLRAELEMMAKNYRISKNRVVDSYVDGGFDVFERRKDIECQWGGKASKMEPSSSARTSLGKPFLKRHFSLGSKWTRSFSENDSVRKKGFWARYRKD 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3654 442 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 261 335 IPR013083 -
Sto9g3654 442 ProSiteProfiles Zinc finger RING-type profile. 275 333 IPR001841 -
Sto9g3654 442 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 436 - -
Sto9g3654 442 SMART ring_2 275 333 IPR001841 -
Sto9g3654 442 PANTHER EXPRESSED PROTEIN 1 436 - -
Sto9g3654 442 SUPERFAMILY RING/U-box 272 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3654 Sto-Chr9 35040068 35042122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3654 - - gmx:100800918 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3654 9 35040068 35042122 Sto9g3654 9 35040068 35042122 ECH