Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3651 ATGGCCTTGTTTGGAGAAaaccgaagaagagaagagaagagcatTGCAAGTCCATCCATCGTGGGGAGAGGCGAAGGAGGCTTAATTAGCATTTACCAATTCAAAGGCAACATGATCTCTCAGTTCTTCGTGCTTTCTCAGAGAGGCGACAACATCGTCTTTCGTGACTATCGCGGCGAAGTACAAAAAGGGAGTGCTGAGACATTTTTCCGGAAAGTGAAGTTTTGGAAAGAAGACGGTGAAGGAGATGCGCCTCCTAATGTAGATGCTGTGAACTACTTTCACGTGAAGGTTTCTGGATTGTTATTTGTTGCTACAACAAGAGTCAACATTTCCCCTTCTCTTGTTCTGGAGCTTCTGCAACGAATTGCTCGCGTCATCAAAGATTACCTTGGTGTTCTTAATGAAGATTCATTGCGGAAAAACTTTGTCCTCGTGTATGAATTACTGGATGAAGTCATTGATTTTGGTTATGTGCAAACTACATCTACTGAGGTTTTGAAGTCGTATGTTTTCAATGAGCCAATTGTGGTTGATGCTGCACGACTGCCTCCCCTTGGTCCAGCATCAATTTTTATGCAAGGGACCAAAAGAATGCCAGGAACTGCTATTACAAAATCAGTGGTTGCAAATGAACCTGGTGGTAGGAAGAGGGAAGAGATTTTTGTTGACGGATTTATACTTACCAGTGAGATAGATGGCACCATCCAGATGAAGAGTTATCTTACTGGCAACCCAGAGATTCGACTTGCTCTTAATGAGGACCTGAGTATAGGAAGAAATGATTATATAAGTTCAGGTGCTGTAGTCCTTGATGATTGTAACTTCCATGAATCCGTGCACCTTGATAATTTTGATATTGACCGAACTTTGACATTGGTGCCACCCGATGGTGAATTTCCCGTCATGAATTATCGCATGACTCAACCATTTAAGCCACCCTTTCGAATCAATGCATTGATTGAAGAAGCAGGATCCCTTAAGGCTGAAGTAATCATTAGAGTGCGAGCTGAGTTCTCACCAAGTATCAATGCTAACCCAGTTCTTGTACAAATGCCTCTGCCAACATATACAACCCGTGTTAATTTTGAGTTGGAGCCTGGAGCTGTTGGAAATACAACTGATTTTAAGGAAGCAAATAAGAGACTGGAGTGGGGCTTAAAGAAGGTTGCTGGTGGAACTGAGCATACTTTACGTGCAAAACTAACATTTTCGCAGGAGATACATGGAAATATCATGAAGGAAGCAGGGCCTCTGAGCATGTCCTTCACTATACCCATGTACAATGCTTCAAAGCTTCAGGTGAAGTACTTGCAAATAGCAAAGAAGTCAAAGACACATAATCCATATCGATGGGTTAGATATGTCGCCCAAGCTAACTCATATGTTGCTCGGTTGTAA 1401 0.4154 MALFGENRRREEKSIASPSIVGRGEGGLISIYQFKGNMISQFFVLSQRGDNIVFRDYRGEVQKGSAETFFRKVKFWKEDGEGDAPPNVDAVNYFHVKVSGLLFVATTRVNISPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFMQGTKRMPGTAITKSVVANEPGGRKREEIFVDGFILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRNDYISSGAVVLDDCNFHESVHLDNFDIDRTLTLVPPDGEFPVMNYRMTQPFKPPFRINALIEEAGSLKAEVIIRVRAEFSPSINANPVLVQMPLPTYTTRVNFELEPGAVGNTTDFKEANKRLEWGLKKVAGGTEHTLRAKLTFSQEIHGNIMKEAGPLSMSFTIPMYNASKLQVKYLQIAKKSKTHNPYRWVRYVAQANSYVARL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3651 466 SUPERFAMILY SNARE-like 38 176 IPR011012 -
Sto9g3651 466 PANTHER AP COMPLEX SUBUNIT MU 39 466 - -
Sto9g3651 466 PIRSF AP_complex_mu 220 466 IPR001392 GO:0006886|GO:0016192|GO:0030131
Sto9g3651 466 PIRSF AP_complex_mu 38 216 IPR001392 GO:0006886|GO:0016192|GO:0030131
Sto9g3651 466 PRINTS Clathrin coat assembly protein signature 49 69 IPR001392 GO:0006886|GO:0016192|GO:0030131
Sto9g3651 466 PRINTS Clathrin coat assembly protein signature 136 163 IPR001392 GO:0006886|GO:0016192|GO:0030131
Sto9g3651 466 PRINTS Clathrin coat assembly protein signature 271 298 IPR001392 GO:0006886|GO:0016192|GO:0030131
Sto9g3651 466 PRINTS Clathrin coat assembly protein signature 384 395 IPR001392 GO:0006886|GO:0016192|GO:0030131
Sto9g3651 466 CDD AP-4_Mu4_Cterm 213 466 - -
Sto9g3651 466 Pfam Adaptor complexes medium subunit family 224 465 IPR028565 -
Sto9g3651 466 Gene3D - 38 176 - -
Sto9g3651 466 CDD AP4_Mu_N 40 178 - -
Sto9g3651 466 Gene3D Mu homology domain, subdomain B 313 465 - -
Sto9g3651 466 PANTHER AP-4 COMPLEX SUBUNIT MU-LIKE 39 466 - -
Sto9g3651 466 ProSiteProfiles Mu homology domain (MHD) profile. 206 465 IPR028565 -
Sto9g3651 466 Gene3D Mu homology domain, subdomain B 224 461 - -
Sto9g3651 466 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 217 465 IPR036168 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3651 Sto-Chr9 35024439 35030856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3651 K12402 - gmx:100800985 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3651 9 35024439 35030856 Sto9g3651 9 35024439 35030856 ECH