Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3646 ATGATTCGGATTTACTACTACGATTCCGATGAACTTAATACTCAGAATCAAAATTCCCTCTTTAACTGGTTGTTGATTCTGCATTTGCCTCCAATTCTGACCCACGCTTGTCTAAAAATGGAAAGTTTTGAAGGGTTCTCAGGTCATGATGAACGTAGAGAGCGAAAATCAGATTTTGAGAATTCCGAGGATGATAGGCGGACCAGAATTGGCAGCCTGAAGAAGAAAGCAATAAATGCGTCAAGCAGATTCAGGCATTCTCTGAAGAAGAAAAGCAGGAGAAAAAGTGCCAGTCGTAGCAATTCTGTTTCCATTGAGGATGTTCGAGATGTTAAGGAACTTCAAGCAGTGGATGCATTTCGACAGGCACTTATGTCAGATAACTTGTTACCTCCAAAACATGATGACTATCATATGTTATTGAGATTCTTGAAAGCAAGGAAGTTTGATATTGAGAAAGCAAAGCACATGTGGGCCAACATGATTCAATGGAGGAAAGACTATGGCACAGATACAATTATGGAGgATTTCGAGTTCAATGAGTTGAATGAAGTTCTGCAGTACTATCCACATGGTTACCATGGCGTGGATAAGGAAGGAAAACCTGTTTATATAGAGAGGCTAGGCAAAGTTGATCCCAGTAAGCTAATGCAAGTAACTACCATCGAAAGATATCTAAGATACCATGTTCAAGGATTTGAGAAAACATTTGCTATTAAGTTTCCAGCTTGCACTATTGCTGCAAAGAGACACATAGATTCAAGCACAACTATTTTGGATGTTCAAGGCGTGGGTTTCAAAAATCTAACCAAGTCTGCACGAGAACTCATCATGCAACTGCAGAAGATAGACGGTGACTACTACCCTGAAACTCTAAGCCGGATGTTTATCATCAATGCTGGTCCTGGTTTTAAGCTACTCTGGAACACAGTGAAAACATTTCTTGATCCCAAAACTACTTCGAAGATTCATGTTCTTGGCAACAAGTTCCAGAGTAAATTACTTGAAATTATTGATGTAAGTGAGCTGCCAGAATTTCTAGGTGGTAGCTGTACTTGCATAGATCAAGGTGGTTGTATGAGGTCCGACAAAGGGCCATGGCAGGACCCAAACATTTTGAAGATGATTCTTAGTGGTGAAGTGCAATGTACTAGACAAATAGTGACAGTTACTAATGATGAGGGGAGGGTGATTGAATGTGATAAGACTTGTTATCCAATGATACGAAGTAGTGATACATCTACAGCAGAATCAGGATCTGAAGTTGAAGATATCACTTCTCCCAAAGCTGGTGGGAACTATATAAACCCTAGGTTAACTCCTGTCCGGGAAGAAGCTAGATTGAATGGTAAAGCTGGTCTTGCTGGAGGTTTCTCTGAGTATGATGAGTATGTTCCCGTAGTTGACAAGGCCGTTGATGTTGGGtggaaggaaaagaaagcaACACCTCAAAATTCATCGGGCTCTACAGAGACATCTCCATCAAGTACTGAAAAATCTCCTGATGGAATCTGTGCTTATATTTGGGCTGTTATAGTGGGTTTCTTTGTTGCCCTTTTTACTCTTGCCTCTGCATTTCGTGTCAACAAGGGAAGTCAGGAGTCTGAATCTGATTCTGCCAAGAATATGCCTAATATGACCACTGTACCAATATCCATGGATACATCTCGTCCTCCTTCACCTGCTCTTGGATTCTCAAAGGCGGAGGACCCACTCTCATCTGCCTTAAAACGGCTAGGTGAACTTGAAGATAAAGTTGACATGCTACAAGCAAAACCTAATGCAATGCCATATGAGAAAGAAGAGCTGCTGAATGCTGCAGTTTATCGTGTGGATGCATTGGAAGCTGAGTTGATTGCTACAAAGAAGAGTtggattttgaattttgacAGTGCGGCTATGGATTCCACTTGCGCAGTTCTGAATCCTAATGTGAATCTCGCTAAGGTTAAAGCAAGCAAGGGAAATAGTGGTACTGTGTTGTGGGGTGAAACTACAAGGCCAAGTCTCAACACCACCTTCTTATCTATTCAATCCCACAACACTTCCAACTTCAAGCCTGGCGTGGCCTACTCTGTTCTCACACCAGACATCAAAAAACAGTCCACCGTGTTCGAAGCACCTAATTTTGAGAGTGCGGAGGCAGACCCTAAAAATGTTGCTTCCGTCATATTGGGCGGTGGTGCTGGAACTCGCCTCTTTCCTCTTACTAGCCGAAGAGCCAAGCCTGCGGTTCCGATTGGAGGGTGTTACAGACTGATAGATATCCCGATGAGCAATTGCATTAACAGTGGCATaagaaaaatattcattttaactCAGTTCAACTCTTTCTCCCTTAATCGCCACTTGTCTCGTACTTATGACTTGGGCAACGGCGTGAACTTTGGAGATGGTTTTGTGGAGGTCTTAGCTGCTACCCAAACACCTGGAGAAGCAGGGAAGAAATGGTTCCAAGGGACAGCTGATGCTGTGAGGCAATTCATATGGGTCTTTGAGGATGCCAAGAACAAGAATGTTGAGCATATATTGATACTTTCGGGTGATCATCTTTATCGAATGAACTATATGGACTTTGTGCAGAAACATATCGACACAAATGCTGATATAACAGTTTCTTGTGTACCCATGGACGACAGCCGTGCATCAGATTATGGGCTGATGAAAATTGATCAAACCGGACGCATTATTCAGTTTGCAGAGAAACCAAAGGGTTCAAATCTGAAGGCAATGCAAGTTGACACTTCCCTTCTTGGATTATCTCCACAAGAAGCGCAGAAATATCCTTACATTGCATCAATGGGTGTTTATGTATTTAGAACTGAGACCCTTTTGAAACTATTGAGATGGAGCTGTCCTTCATGCAATGACTTTGGATCTGAAATTATTCCATCTGCTGTGAGAGAATACAATGTCCAAGCATATTTGTTCAATGACTACTGGGAAGACATTGGAACTATAAAGTCCTTCTTTGACGCCAATCTGGCCCTAACAGAACAGCCtcccaaatttgaattttatgacCCAAAGACACCTTTCTTCACTTCTCCAAGATTCCTTCCACCCACTAAAGTTGAAAATTGCAAGgttgtgaatgcaattgtttCTCATGGTTGCTTTTTGAGGGATTGTAGTGTTCAACATTCTATCGTCGGTGTCCGCTCACGTTTAGAATCCGGCGTTGATCTTCAGGATACCATGATGATGGGTGCAGACTACTATCAAACCGAGTCTGAAATTGCTTCTCAGTTGGCAGAAGGAAAAGTTCCAATTGGTGTTGGAGAGAACACTAAAATCAGGAACTGTATAATCGACAAGAATGCCAAGATAGGAAGAAATGTGATCATTGAAAATCGTGATGGCGTTCAAGAGGCAGACAAAACAAAGGAAGGCTTCTACATTAGGTCTGGCATCACAGTTATACTGAAGAATGCAACAATAAAAGATGGAACAGTTATATAA 3462 0.4096 MIRIYYYDSDELNTQNQNSLFNWLLILHLPPILTHACLKMESFEGFSGHDERRERKSDFENSEDDRRTRIGSLKKKAINASSRFRHSLKKKSRRKSASRSNSVSIEDVRDVKELQAVDAFRQALMSDNLLPPKHDDYHMLLRFLKARKFDIEKAKHMWANMIQWRKDYGTDTIMEDFEFNELNEVLQYYPHGYHGVDKEGKPVYIERLGKVDPSKLMQVTTIERYLRYHVQGFEKTFAIKFPACTIAAKRHIDSSTTILDVQGVGFKNLTKSARELIMQLQKIDGDYYPETLSRMFIINAGPGFKLLWNTVKTFLDPKTTSKIHVLGNKFQSKLLEIIDVSELPEFLGGSCTCIDQGGCMRSDKGPWQDPNILKMILSGEVQCTRQIVTVTNDEGRVIECDKTCYPMIRSSDTSTAESGSEVEDITSPKAGGNYINPRLTPVREEARLNGKAGLAGGFSEYDEYVPVVDKAVDVGWKEKKATPQNSSGSTETSPSSTEKSPDGICAYIWAVIVGFFVALFTLASAFRVNKGSQESESDSAKNMPNMTTVPISMDTSRPPSPALGFSKAEDPLSSALKRLGELEDKVDMLQAKPNAMPYEKEELLNAAVYRVDALEAELIATKKSWILNFDSAAMDSTCAVLNPNVNLAKVKASKGNSGTVLWGETTRPSLNTTFLSIQSHNTSNFKPGVAYSVLTPDIKKQSTVFEAPNFESAEADPKNVASVILGGGAGTRLFPLTSRRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRTYDLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVEHILILSGDHLYRMNYMDFVQKHIDTNADITVSCVPMDDSRASDYGLMKIDQTGRIIQFAEKPKGSNLKAMQVDTSLLGLSPQEAQKYPYIASMGVYVFRTETLLKLLRWSCPSCNDFGSEIIPSAVREYNVQAYLFNDYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTSPRFLPPTKVENCKVVNAIVSHGCFLRDCSVQHSIVGVRSRLESGVDLQDTMMMGADYYQTESEIASQLAEGKVPIGVGENTKIRNCIIDKNAKIGRNVIIENRDGVQEADKTKEGFYIRSGITVILKNATIKDGTVI 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3646 1153 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 817 825 IPR005836 GO:0005978|GO:0008878
Sto9g3646 1153 Coils Coil 572 592 - -
Sto9g3646 1153 CDD LbH_G1P_AT_C 1021 1147 - -
Sto9g3646 1153 Pfam Nucleotidyl transferase 722 999 IPR005835 GO:0009058|GO:0016779
Sto9g3646 1153 Gene3D - 83 168 - -
Sto9g3646 1153 Pfam CRAL/TRIO, N-terminal domain 134 160 IPR011074 -
Sto9g3646 1153 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 40 624 - -
Sto9g3646 1153 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 40 624 - -
Sto9g3646 1153 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 181 355 IPR001251 -
Sto9g3646 1153 MobiDBLite consensus disorder prediction 479 499 - -
Sto9g3646 1153 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 706 1018 IPR029044 -
Sto9g3646 1153 SUPERFAMILY CRAL/TRIO N-terminal domain 112 177 IPR036273 -
Sto9g3646 1153 MobiDBLite consensus disorder prediction 480 499 - -
Sto9g3646 1153 SMART CRAL_TRIO_N_2 136 161 IPR011074 -
Sto9g3646 1153 SMART sec14_4 181 352 IPR001251 -
Sto9g3646 1153 Pfam CRAL/TRIO domain 187 349 IPR001251 -
Sto9g3646 1153 Gene3D - 169 379 IPR036865 -
Sto9g3646 1153 SUPERFAMILY Trimeric LpxA-like enzymes 1015 1153 IPR011004 -
Sto9g3646 1153 SUPERFAMILY CRAL/TRIO domain 181 374 IPR036865 -
Sto9g3646 1153 CDD ADP_Glucose_PP 723 984 - -
Sto9g3646 1153 SUPERFAMILY Nucleotide-diphospho-sugar transferases 719 1114 IPR029044 -
Sto9g3646 1153 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 726 745 IPR005836 GO:0005978|GO:0008878
Sto9g3646 1153 PRINTS Cellular retinaldehyde-binding protein signature 139 161 - -
Sto9g3646 1153 PRINTS Cellular retinaldehyde-binding protein signature 308 327 - -
Sto9g3646 1153 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 721 1117 IPR011831 GO:0005978|GO:0008878
Sto9g3646 1153 MobiDBLite consensus disorder prediction 411 437 - -
Sto9g3646 1153 CDD SEC14 182 349 IPR001251 -
Sto9g3646 1153 Gene3D Hexapeptide repeat proteins 1019 1153 - -
Sto9g3646 1153 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 932 942 IPR005836 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3646 Sto-Chr9 34980037 34990213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3646 115 346 Acyl Lipid Metabolism Gene Families AT5G47730 30.579 3.09e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3646 K00975 - gmx:100799316 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3646 9 34980037 34990213 Sto9g3646 9 34980037 34990213 ECH