Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3645 ATGATTTCTATGGAGATGCCAAAAATTGTTTTAACCACACAAAATTTGCACGGTTCAGGTTATGGTTCATTTCACCTTAAAGGGTACACATTATGGCCCCACATGATCACAGGGCTGGACTTCGTAATATCTGAAGCCGGAAGATATGGGATGAAGCTGGTGTTGAGTTTGGTGAATAACTATGAGAATTTGGGAGGAAAGCAGCAGTACGTGGAGTGGGCAAGGAATCAGGGCCAGTCCATTCATTCTGAAGATGATTTTTTCACAAACCCTGTGGTTAAAGGATACTACAAAAACCACATCCAaACTGTTCTTACAAGACGTAACAGCATCACCGGAGTTGCTTACAAAGACGACCCAACTATAATGGCTTGGGAGCTGATGAATGAGATAAGGTGCCCTTCAGATCAATCAGGAAAAGCCGTACAGGCTTGGATTACTGAGATGGCATCTTACTTGAAATCCATAGATGGAAACCACTTGCTAGAAGCTGGTCTGGAGGGTTTCTATGGTGAATCAAAGAAGGAGTCTAATCCCAATTTCCAAGTAGGAACTGATTTCATTGCCAACAACCAAATCCCTGCCATTGATTTTGCTACTCTTCACTCATACCCTGATCAATGGTTATCAGGTTCAAATTATGATGATCAAATCTCATTTCTGAGTGGCTGGCTGAACCAACACATCCAAGATGCACAAAACACCCTTCACAAGCCACTCCTGTTGGCAGAGTTCGGAATATCAACGAAGAATTTAGGATCCAACTCAAAGCCAAGGGACCAGCTTTTCAACACTGTGTATTCTGCCATCTATTCATCGGCAAGTGGTGGTGGCGCTGCCGTGGGGGGCTTATTTTGGCAACTTCTAGCTGAAGGAATGGACTCTTTCCGAGATGGTTATGAGGTGGTGTTGGGTGAGAACCCCTCAACCGCCAGTTTGATTGCTCAAGAGTCTCAAAAGCTAAATCGAATTCGGAAGATGTATGCCAGACTCAGAAACATTGAGAAGTGGAATAAAGCAAGAGATATTAGAAGCGCACAAAATGGCAGGCATTGA 1056 0.4366 MISMEMPKIVLTTQNLHGSGYGSFHLKGYTLWPHMITGLDFVISEAGRYGMKLVLSLVNNYENLGGKQQYVEWARNQGQSIHSEDDFFTNPVVKGYYKNHIQTVLTRRNSITGVAYKDDPTIMAWELMNEIRCPSDQSGKAVQAWITEMASYLKSIDGNHLLEAGLEGFYGESKKESNPNFQVGTDFIANNQIPAIDFATLHSYPDQWLSGSNYDDQISFLSGWLNQHIQDAQNTLHKPLLLAEFGISTKNLGSNSKPRDQLFNTVYSAIYSSASGGGAAVGGLFWQLLAEGMDSFRDGYEVVLGENPSTASLIAQESQKLNRIRKMYARLRNIEKWNKARDIRSAQNGRH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3645 351 Gene3D Glycosidases 16 325 - -
Sto9g3645 351 SUPERFAMILY (Trans)glycosidases 27 307 IPR017853 -
Sto9g3645 351 PANTHER - 34 347 IPR045053 GO:0004553
Sto9g3645 351 Pfam Cellulase (glycosyl hydrolase family 5) 36 265 IPR001547 GO:0004553|GO:0071704
Sto9g3645 351 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 34 347 - -
Sto9g3645 351 Coils Coil 314 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3645 Sto-Chr9 34977649 34979713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3645 35 341 Glycoside Hydrolase AT5G66460 61.613 8.46e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3645 K19355 - gmx:100794126 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3645 9 34977649 34979713 Sto9g3645 9 34977649 34979713 ECH