Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3644 ATGATCTTTACTAAGCCATCCATGAGAACACGGGTTTCATTTGAGACTGGATTTACGTTGTTGGGTGGGCATGCCATATATTTAGGACCTGATGATATCCAAATGGGTAAGCGGGAGGAGACTCGTGATATTGCTCGTGTTTTGTCTCGCTATAATGACATAATTATGGCTCGAGTTTTTGCTCATCAGGACATCCTTGATCTTGCAAAGTATGCAACTGTGCCAGTCATCAATGGCTTGACAGACTACAACCATCCTTGCCAGATAATGGCTGACGCCCTTACTATAATTGAACATGTTGGTCGGTTGGAAGGGACCAAGGTTGTCTATGTAGGAGATGGAAATAATATTGTTCACTCATGGTTATTGTTGGCATCTGTCATACCTTTTCACTTCGTTTGTGCATGTCCAAAAGGTTTTGAACCTGATGAGAAAACAGTTCAGAAAGCTCAGAAGGCTGGAATCAGTAAAATTGAGATAACTGATGATCCAAAAGAAGCTGTTAGGGGAGCGGATGTTGTGTATTCAGATGTCTGGGCGAGCATGGGCCAAAAGGAGGAGGCTGCCTACCGCCGCCAAGTTTTTAAAGAATTTCAGGTGGACCAAAGTCTTATGAATTTGGCAGGCCCAAAAGCGTTCTTCATGCATTGCTTACCGGCGGAAAGAGGGGTGGAGGTGACTGATGAAGTCATTGAAGCCCCAAATTCAATTGTCTTCCCACAAGCAGAGAACCGATTGCATGCGCAGAATGCTATAATGCTTCATGTACTAGGCAAGTAA 780 0.4397 MIFTKPSMRTRVSFETGFTLLGGHAIYLGPDDIQMGKREETRDIARVLSRYNDIIMARVFAHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNIVHSWLLLASVIPFHFVCACPKGFEPDEKTVQKAQKAGISKIEITDDPKEAVRGADVVYSDVWASMGQKEEAAYRRQVFKEFQVDQSLMNLAGPKAFFMHCLPAERGVEVTDEVIEAPNSIVFPQAENRLHAQNAIMLHVLGK 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3644 259 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, CHLOROPLASTIC-LIKE 1 258 - -
Sto9g3644 259 TIGRFAM orni_carb_tr: ornithine carbamoyltransferase 1 257 IPR002292 GO:0016743
Sto9g3644 259 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 1 258 - -
Sto9g3644 259 Gene3D Aspartate/ornithine carbamoyltransferase 1 253 IPR036901 GO:0006520|GO:0016597|GO:0016743
Sto9g3644 259 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 104 255 IPR006131 GO:0006520|GO:0016597|GO:0016743
Sto9g3644 259 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 3 22 IPR006130 GO:0006520|GO:0016597|GO:0016743
Sto9g3644 259 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 85 96 IPR006130 GO:0006520|GO:0016597|GO:0016743
Sto9g3644 259 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 210 219 IPR006130 GO:0006520|GO:0016597|GO:0016743
Sto9g3644 259 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 222 245 IPR006130 GO:0006520|GO:0016597|GO:0016743
Sto9g3644 259 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 1 258 IPR036901 GO:0006520|GO:0016597|GO:0016743
Sto9g3644 259 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 1 98 IPR006132 GO:0006520|GO:0016743
Sto9g3644 259 Gene3D Aspartate/ornithine carbamoyltransferase 88 244 IPR036901 GO:0006520|GO:0016597|GO:0016743
Sto9g3644 259 PRINTS Ornithine carbamoyltransferase signature 1 15 IPR002292 GO:0016743
Sto9g3644 259 PRINTS Ornithine carbamoyltransferase signature 34 47 IPR002292 GO:0016743
Sto9g3644 259 PRINTS Ornithine carbamoyltransferase signature 74 88 IPR002292 GO:0016743
Sto9g3644 259 PRINTS Ornithine carbamoyltransferase signature 174 184 IPR002292 GO:0016743
Sto9g3644 259 PRINTS Ornithine carbamoyltransferase signature 236 247 IPR002292 GO:0016743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3644 Sto-Chr9 34970109 34971618 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3644 K00611 - gmx:100796780 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3644 9 34970109 34971618 Sto9g3644 9 34970109 34971618 ECH