Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3642 ATGTTCAGAAACCAGTACGACACCGATGTGACGACATGGAGTCCCGCCGGGAGGCTGTTCCAGGTGGAGTACGCCATGGAGGCAGTGAAGCAAGGTTCCGCCGCAATTGGACTCCGATCCAAGACTCATGTGGTGCTGGCTTGCGTCAACAAGGCTAACTCCGAGCTCTCCTCTCACCAGAAAAAGATCTTCAAGGTTGATGACCACATCGGAGTTGCCATCGCTGGCCTTACCGCCGATGGTCGTGTTCTCTCCCGCTATATGCGATCCGAGTGTATCAACTACAGCTATACCTACGAGTCCCCTCTTCCTGTCGGTCGACTCGTTGTTCAACTCGCCGATAAGGCTCAGGTTTGCACCCAGAGATCATGGAAAAGACCTTATGGTGTTGGTCTCCTGGTGGCTGGATTAGATGAATCTGGAGCTCATCTCTACTACAATTGCCCAAGTGGAAACTACTTTGAATATCAGGCTTTTGCAATTGGGTCTCGTTCACAAGCTGCGAAGACATATTTAGAACGCAGGTTTGAGAACTTTACGGGCTCCTCACGGGAGGATCTGATTAAAGATGCACTTATTGCAACAAGGGAGACCTTGCAGGATCAGGAGACTGTACAACAGTTGATTGATGACTTTGAAATCGTGAGAGAGGAAGAAGTTGCCCCTCCTGAATTTCAGCCAGCAACCGAGCAGGATGCTGGTGCAGACCAAGGTCCTCCTGCAGATGAGGGTGCTGGTGCAGACCAAGGTGTTGCTCCAATGGACATTTGA 771 0.5084 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFTGSSREDLIKDALIATRETLQDQETVQQLIDDFEIVREEEVAPPEFQPATEQDAGADQGPPADEGAGADQGVAPMDI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3642 256 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 222 IPR029055 -
Sto9g3642 256 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 201 - -
Sto9g3642 256 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 202 IPR029055 -
Sto9g3642 256 MobiDBLite consensus disorder prediction 219 256 - -
Sto9g3642 256 Pfam Proteasome subunit 29 201 IPR001353 GO:0005839|GO:0051603
Sto9g3642 256 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 201 - -
Sto9g3642 256 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Sto9g3642 256 ProSiteProfiles Proteasome alpha-type subunit profile. 21 229 IPR023332 -
Sto9g3642 256 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Sto9g3642 256 CDD proteasome_alpha_type_1 6 203 IPR035144 GO:0019773
Sto9g3642 256 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3642 Sto-Chr9 34953900 34956597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3642 K02725 - gmx:100797380 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3642 9 34953900 34956597 Sto9g3642 9 34953900 34956597 ECH