Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3631 ATGGACCGCGTGCTGGAGACGATATTGATTCTTGTGGAGATTATGTTGATCATATTTGAGGCTAATTGGTTCAACGATTTGGTTGCCGAGGGATTCGAGAGAAGTGTTAGGCATACATCCAAGATTAAGGAGATGAGGGCTGCAATTGGACCCCTATCTGGACCCAGCTTGAAGTACTGCACTGATGATTGTTTGAGGAGATACTTGGAAGCTCGCAACTGGAATGTGGACAAGTCCAAGAAGATGCTGGAGGAGACGCTAAGATGGAGATCAACCTATAAGCCTGAAGAAATCCGCTGGCATGAAGTAGCAGTTGAAGGAGAGACAGGGAAGTTGTACAGAGCAGGTTTTCATGACCGACAAGGAAGAACAGTTCTTATATTAAGACCTGGAATGCAGAACACTTCTTCAATTGAGAATCAGATGCGACATCTGGTGTATCTTTTGGAAAATGCTACCCTTAACCTTCCACAAGGTCAAGAACAAATGGCATGGTTGATAGATTTCACTGGCTGGTCCTTGAGCACCAGTGTGCCTATCAAATCAGCCAGAGAGACTGTCAACATTCTTCAGAGCCATTATCCTGAGAGGCTTGCCATAGCATTTCTTTACAATCCCCCTCGGATTTTTGAAGCTTTTTGGAAGATAGTCAAATACTTCCTGGATACCAAGACGTTTCAAAAGGTGAAATTTGTCTACCCCAAAAACAAAGATAGCGTGGAGCTCATGAAGTCATATTTTGATGAGGAAAACCTTCCCACAGCATTTGGAGGAAAAGCAGTTTTTAACTATAACCATGAGGAGTTCTCCAGAGTAATGGCTCAGGACGATCTGAAAACTGCAGCCTTTTGGGGATCTGATGAGAAGCTTGCAGATCACATTGGTAATGGGCATTCAGGAGCCAGTATTCCGTGA 915 0.4393 MDRVLETILILVEIMLIIFEANWFNDLVAEGFERSVRHTSKIKEMRAAIGPLSGPSLKYCTDDCLRRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAVEGETGKLYRAGFHDRQGRTVLILRPGMQNTSSIENQMRHLVYLLENATLNLPQGQEQMAWLIDFTGWSLSTSVPIKSARETVNILQSHYPERLAIAFLYNPPRIFEAFWKIVKYFLDTKTFQKVKFVYPKNKDSVELMKSYFDEENLPTAFGGKAVFNYNHEEFSRVMAQDDLKTAAFWGSDEKLADHIGNGHSGASIP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3631 304 Pfam CRAL/TRIO domain 109 258 IPR001251 -
Sto9g3631 304 SUPERFAMILY CRAL/TRIO domain 100 275 IPR036865 -
Sto9g3631 304 SMART CRAL_TRIO_N_2 61 86 IPR011074 -
Sto9g3631 304 Gene3D - 22 297 IPR036865 -
Sto9g3631 304 PANTHER RANDOM SLUG PROTEIN 5-LIKE 38 302 - -
Sto9g3631 304 Pfam CRAL/TRIO, N-terminal domain 61 85 IPR011074 -
Sto9g3631 304 SMART sec14_4 106 261 IPR001251 -
Sto9g3631 304 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 102 264 IPR001251 -
Sto9g3631 304 PANTHER GH16843P 38 302 - -
Sto9g3631 304 CDD SEC14 108 259 IPR001251 -
Sto9g3631 304 SUPERFAMILY CRAL/TRIO N-terminal domain 34 102 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3631 Sto-Chr9 34906699 34913830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3631 65 253 Acyl Lipid Metabolism Gene Families AT1G55840 29.469 1.26e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3631 - - aprc:113847293 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3631 9 34906699 34913830 Sto9g3631 9 34906699 34913830 ECH