Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3602 atgGCGAAATCCAGCACCGACGATGCTGAGCTTCGGCGAGCTTGTGAGTCTGCAATGGAGGGCACCAAGGAGAAGGTCGTCATGTCGATCCGTGTTGCTAAGAGTCACGGGGTCTGGGGAAAGTCTGTCAAGCTTGGTCGTCAAATGGCAAAGCCTAGGGTTCTCGCTCTCTCTAGTACGGCCTTTTTTTGTGCAGTAAAATCAAAAGGTCAGAGGACAACAGCTTTTCTTCGTGTCTTAAAGTATACTACAGGAGGAGTTCTTGAGCCTGCAAAAATATACAAGCTTAAGCATCTCTCAAAAGTGGAAGTTACAGCAAATGATCCCAGTGGATGTACTTTCACATTGGGATTTGATAACCTCAGAAGTCAGAGTGTAGCTCCTCCTCAGTGGACGATGCGCAATATTGATGACAGGAACCGACTACTGCTAGGCATCTTAAATATATGCAAAGATGTTCTAGGTCGCCTTCCTAAGGTTGTTGGCATTGATGTTGTGGAGATGGCTCTCTGGGCTAAGGAAAACAAACTCTCAGTTTCTACTCAAAGGAGCCCTCAAGATGGTGGTCCTGTTGCATCCGCTGTGACAGAGCCAGAAATGAAAGTCACTGTTGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATAGAGGCTCTTTTGGGAACCTACGTCATTGGTATTGGTGAAGCTGAAGAATTTTCTGAAAGGTTGAAGAGAGAGCTCCAGGCTTTGGAAGCAGCAAATGTGCATGCCATTTTAGAAAGTGAACCAATGATAGAGGAGGTGTTGCAAGGGCTTGAAGCAGCAACAAGTTGTGTGGAAGACATGGAAGAATGGTTGGGAATTTTCAATGTGAAACTCCGGCACATGAGGGAGGATATTGAATCGATAGAAACTCGCAACAACAATTTGGAAATGCAATCTGTAAATAACAAAGCCCTCATTGAGGAGCTTGATAAGCTTGTTGAGCGGCTTCGGGTCCCTTCTGAGTATGCAGCGTGTCTGACAGGAGGTTCATTTGATGAGGCACGGATGCTTCAAAATGTCGAAGCATGTGAGTGGTTGACTGGCGCCTTGCGTGGTCTTGAAGTGCCTAATTTAGATCCTGCTTATGCAAACATGAGAGCCGTTAAAGAAAAGCGTGCAGAACTTGAAAAGTTAAAATCTACTTTTGTCAGGAGAGCTTCTGAGTTCTTAAGAAACTACTTTGCTAGTTTGGTGGATTTCATGATAAGTGACAAAAGTTACTTTTCTCAGCGCGGACAGTTGAAGAGGCCTGATCATGCTGACTTGCGGTATAAGTGCAGGACTTATGCGCGGCTTCTTCAACATTTAAAGAGTCTGGATAAGAATTGTTTGGGTCCACTGAGAAAAGCTTATTGCAGTTCTCTTAACTTGCTTCTTCGCAGGGAGGCTCGTGAGTTTGCAAACGAGCTTCGTGCTAGTACTAAAGCATCCAGAAATCCAACTGTTTGGCTTGAAGGTTCAACAGGTTCTGGTCAGAATGTAAATGCTGCTGACACCTCTACAGTATCTGAGGCTTATGCAAAGATGCTTACAATTTTTATCCCTCTTCTAGTGGATGAGAGCTCCTTTTTTGCACATTTTATGTGCTTTGAAGTTCCTACATTAGTTCCTCCTGGAGGTGTTGTTAATGGAAATAAAACTGGATATGATGATGATGCCAATGATGATGATCTGGGAATTATGGACATTGATGATAATGACAGTAAGCCTGGTAAAAGTTCTGTGGAGCTTGCAGCTTTGAATGAATCACTACAGGATTTGCTTGATGGCATCCAAGAAGACTTCTATGCTGTTGTGGATTGGGCATACAAGATTGATCCTTTGCGCTGCATATCGATGCATGGAATAACAGAGCGCTATCTCTCTGGCCAGAAAGCTGATGCAGCAGGATTTGTACGCCTTTTGCTTGGTGACCTTGAGTCTCGGATATCCATGCAGTTCAGCCGCTTTGTTGATGAAGCTTGCCATCAGATTGAAAGAAATGAACGCAATGTACGCCAAATGGGTGTCTTGTCTTATATTCCCAGATTTGCAACCCTCGCAACACGGATGGAGCAATACATTCAGGGCCAATCTAGGGATTTGGTTGACCAGGCATACACAAAATTTGTTAGCGTAATGTTTGCAACTTTGgaaaaaatttcacaaactgATCCAAAGTATGcagatatttttcttttagagaaTTATGCAGCGTTTCAGAATAGTTTGTATGACCTTGCCAATGTTGTGCCCACTTTGGCCAAGTTTTACCATCAGGCCAGTGAAGCCTATGAACAAGCTTGCACACgccatattaatatgattattatttatcAATTCGAACGTCTTTTCCAGTTTTCTAAAAGGATTGAGGATTTGATGTTCACTGTTGCCCCTGAAGAGATTCCTTTCCAGCTTGGGTTGTCAAAGATGGATCTTCGGAAGGTGTTAAAATCAAGTTTATCTGGGGTTGACAAGTCCATTGCCGCAATGTACAAGAGATTGCAAAAAAACTTGACTTCAGAGGAACTGTTACCTTCCTTATGGGACAAATGCAAGAAGGAGTTTCTCGACAAGTACGAAAGCTTTGCCCAACTTGTGGCCAAGATTTATCCTACAGAAACAATGCCATCTGTTGCAGAGATGAGGGACCTTTTAGCTTCCATGTAA 2682 0.4277 MAKSSTDDAELRRACESAMEGTKEKVVMSIRVAKSHGVWGKSVKLGRQMAKPRVLALSSTAFFCAVKSKGQRTTAFLRVLKYTTGGVLEPAKIYKLKHLSKVEVTANDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLGILNICKDVLGRLPKVVGIDVVEMALWAKENKLSVSTQRSPQDGGPVASAVTEPEMKVTVEKELVSQAEEEDIEALLGTYVIGIGEAEEFSERLKRELQALEAANVHAILESEPMIEEVLQGLEAATSCVEDMEEWLGIFNVKLRHMREDIESIETRNNNLEMQSVNNKALIEELDKLVERLRVPSEYAACLTGGSFDEARMLQNVEACEWLTGALRGLEVPNLDPAYANMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNAADTSTVSEAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKTGYDDDANDDDLGIMDIDDNDSKPGKSSVELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLESRISMQFSRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSVMFATLEKISQTDPKYADIFLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHINMIIIYQFERLFQFSKRIEDLMFTVAPEEIPFQLGLSKMDLRKVLKSSLSGVDKSIAAMYKRLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKIYPTETMPSVAEMRDLLASM 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3602 893 Coils Coil 288 325 - -
Sto9g3602 893 PANTHER SEC3/SYNTAXIN-RELATED 1 893 - -
Sto9g3602 893 SMART Sec3_PIP2_bind_2 48 153 IPR028258 -
Sto9g3602 893 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 50 151 IPR028258 -
Sto9g3602 893 Pfam Exocyst complex component Sec3 231 491 IPR019160 GO:0000145|GO:0006887
Sto9g3602 893 Pfam Exocyst complex component Sec3 586 876 IPR019160 GO:0000145|GO:0006887
Sto9g3602 893 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 893 - -
Sto9g3602 893 Coils Coil 228 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3602 Sto-Chr9 34744852 34758187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3602 1 893 EF-hand Containing Proteins AT1G47550 86.161 0.0 1590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3602 K19983 - tcc:18591318 1569.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3602 9 34744852 34758187 Sto9g3602 9 34744852 34758187 ECH