Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3571 ATGGAGAGGCTGCAGAGGATGTTTACAGGTGCAGGAGGTGCGTTGGGCCACTCTCCTGACTCGCCAACTCTTGATTCCTCTGAGCAGGTTTATATCTCCTCGCTTGCCCTTCTGAAAATGCTCAAACACGGAAGAGCTGGTGTTCCCATGGAAGTGATGGGTTTGATGTTGGGGGAGTTTGTGGATGAGTATACCGTCCGCGTCGTAGACGTCTTTGCCATGCCACAGAGTGGTACTGGTGTTAGTGTTGAAGCCGTCGATCATGTATTTCAGACTAACATGCTTGATATGCTCAAGCAAACAGGAAGACCAGAGATGGTTGTGGGGTGGTATCATTCACATCCTGGATTTGGTTGTTGGCTTTCTGGAGTGGACATTAATACACAGCAGAGTTTTGAAGCTTTAAACCAACGTTCTGTGGCTGTGGTGGTGGATCCTATTCAGAGTGTTAAAGGCAAAGTTGTAATTGATGCTTTTCGGCTGATTAATCCACAAACTATGATGCTTGGTCAGGAACCACGTCAGACAACATCTAACCTTGGCCATCTCAATAAACCATCTATTCAAGCTCTGATCCATGGCTTGAACCGACATTATTACTCCATAGCCATTAATTATAGGAAGAATGAGCTTGAAGAGAAGATGTTACTAAACCTTCACAAGAAGAAATGGACCGATGGTTTGACACTGAGGCCTTTTGATGCACATTCCAAAACTAATGAACAGACTGTTCAGGAGATGCTAAATTTAGCCGTCAAGTACAACAGGGCCGTGCAGGAGGAAGATGAGTTGCCGCCTGAAAAGCTTGCAATTGTTAACGTGGGAAGGCAAGATGCTAAGAAGCACCTTGAAGAGCATGTTTCCAATTTGATGTCTTCAAACATAGTTCAGACTTTGGGAATGATGCTTGACACAGTTGTGTTTTAG 927 0.4477 MERLQRMFTGAGGALGHSPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRSVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRPFDAHSKTNEQTVQEMLNLAVKYNRAVQEEDELPPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTLGMMLDTVVF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3571 308 SUPERFAMILY JAB1/MPN domain 30 167 - -
Sto9g3571 308 ProSiteProfiles MPN domain profile. 30 165 IPR037518 -
Sto9g3571 308 Gene3D Cytidine Deaminase, domain 2 16 233 - -
Sto9g3571 308 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 1 308 - -
Sto9g3571 308 Pfam Maintenance of mitochondrial structure and function 172 295 IPR024969 -
Sto9g3571 308 CDD MPN_RPN11_CSN5 19 285 - -
Sto9g3571 308 SMART pad1_6 29 164 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto9g3571 308 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 26 137 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto9g3571 308 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 14 HOMOLOG 1 308 IPR035299 GO:0008237|GO:0061578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3571 Sto-Chr9 34572203 34574823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3571 K03030 - gmx:100813116 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3571 9 34572203 34574823 Sto9g3571 9 34572203 34574823 ECH