Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3476 ATGGCTAGTAATTCTCAGCCCTCAAATATGCAGCCTCTTCGGCCTCCTTCAGTTGGATCCTTGGGTCCTCAAAGTGTTGGTTCACCCTTATCTATGCAATTTCGGCCAGTTATTCCAGCCCAGCAGGGGCAACCATTTGCACCAACAACATCACAACAATTTGGACCTGTGGGACAAGGCATTTCTTCTTCAAATGTTGGGATGCCTGTTGTTCAAAGCCAGCAATTGCAGTATTCTCAACCTATGCAACAACTGAATCCTAGACCAATTCAGCCTGGTCACGGTGCACCATATATTCAGACAAATAGGCCGATGGTGTCTGCTCCACTACATTCACAGCAAACTGTTCCCCATTTGGGAAATCATATGCCTGGCTTGGGTGTTTCTGGAGCACCTCCGCATTCTTCATATACTTTCACACATCCTTATGGTCAGCAGCAAGATAATGTTAATGCATTAGCTCAATACCAGCCTCCTCATCAGATGAATGCACCTCCTGGAGGACAACCTTGGATGTCCTCTGTATCTCAGAGCACTGCATCTGTTACACCAGTGCACCATGCTGCAGTACAATCATCTGGTACTACATCAGCGGATGCAGCAACAACTGGCTCGAGCCAGAATTCCTCATCTGATTGGCAAGAGCATACTTCTGCTGACGGGAGAAGATATTACTACAATAAGAGGACAAGACAATCTAGTTGGGAGAAACCTTTGGAATTAATGTCGCCTATTGAGGTGAGCTTTGGTGATTTGTTGCTGTTGCTATATCATGGCAAGTCAGGAGAAATTTTAACAACTGCTCTATATGGTCACTGTGAAGGTTTGCACTTCCTCAAGGCAGGCAATAGTTTGCTATTTACGAGGGCTGATGCTTCCACTGTTTGGAAAGAATTTACTTCTCCAGAGGGAAGAAAATATTATTTCAACAAGGTTACACAGCAATCTACGTGGACAATACCAGAGGACTTAAAGGTTTGTGATTATTATGTGATTGTTTTCTGGATTTTTGAAAGGCTGCATCAAATCTCTCACTCCAAATTGCAAATTTCCTCCCAGTTGGCCCGCGAACAGGCTCAAAAAGCTAGTAACACCGGAATGAAGCCAGAGACAAGTGACGCATCCAATGTCGCTGATGTCTCATTGGCTGCAACATCTACTGCAGCTAATGCAGCTGGCTCCATTACTTCTATGACATCAACTGGGGTTGCTACTAGCCCAGTTCCTGTTACTCCTATTGTCACTACCACTGATCCTCGTGTGGTTTCTGGGTTACCAACAATCCCCATTTCCCACTCTACAATCACTTCAAGTGCCAGTGGAGTTGAAGCAAGTACTGTGACAACTTTGGATGCTGTACCTACAGTTGTTGCATTAAGATCAGGAGTAGCTGCAAATTCACAAGATTCCAGTGCCCCATCCATGTATCGATATGCTCTGCCTTATTCTTTTGTTGAAAATCAAGCATTGCAGGATGTTTTTACTTCTGCGAATGGAGCTTCTCAGCAAGATATGGAGGTATTATTCATTTGTTGTTTAGAATTGTTGGATTATTTATCACAAGGAAAGTCTGAAGAATTTGGAGACTTCTActgtgcatgtgaagccttaGGCATAAACATTCATAAACTCATGCATGCCAATTTTGTGTCTAATGCAGTTTATGCTTTATCTACTGACAAAGAAGCCAAAAGAGGAATGGCAGTGGCTGGAAAAACTAACGTGACTCCACCAGAGGAGAAAGCAAATGATGATGAACCCTTGGTCTATGCAAATAAGTTGGAGGCAAAAAATGCATTTAAAGCACTTCTGGAATCTGCAAATGTTCAGTCTGATTGGACCTGGGAACAGGCAATGAGAGAGATCATTAATGACAAAAGGTATAGTGCCTTAAAAACACTTGGGGAACGTAAGCAAGCTTTTAATGAGGTGAGAAACAAGCCCCTTGCACATTTCAGGAACAAACTTGTAGATTTTCAGTTTGCATCTAGTGAATTGGACCTGTGCTGCAATTACTTGGGCCAAAGGAAGAAGCTAGAGGCTGAGGAGAGGCGTATGAGGCAGAAAAGGGCTCGTGAAGAATTTTCAAAGATGTTAGAAGAGTGCAAGGAGCTTACATCATCCACTAGATGGAGGCATGTTTCTACTAGTTTAATTATGATGTTCTTTAGTTGCAAAGCTGTAACTATGTTTGAGAATGATGAACGGTTCAAGGCTGTTGAACGAGCTAGAGATCGGGAAGATCTTTTCGAAAGCTACATGGTGGAACTTGAGAGGAAGATTTTAGGGAAAGCTTATTGCTCTGCTACTGATGGGTGTGTGCTTATATTGGAAAAGGAAAATGCTGCGGAGGAACACAGGCGAAATATTGCTGAATTCAGGAAATTTTTGGAGTCCTGTGATTTTGTGAAGGTGTATAGTCCGTGGCGGAAGGTCCAAGATCGATTAGAGGATGATGAGAGATGTACACGTCTTGAAAAGATAGATCGCTTGCTTGTTTTCCAGGACTACATTCGTGAATTGGAaaaggaagaggaggagcaaaaaagaatacaaaagGAACAACTCCGAAGGACTGAAAGGAAAAACCGTGATGCATTTCGCAAGTTGTTGGAAGAACATGTTGCTTCTGGAATTCTTACGGCTAAAACACATTGGCGAGAATATTGCATGATGGTCAAGGGTTTGCCTCAATATCAAGCTGTTGCATCGAACACATCCGGTTCAACCCCAAGAGATTTATTTGAAGATGCTACTGAAGATCTTGAGAAAAAGTATCATGAAGATAAGGCACGTGTAAAAGATGCTGTCAAGTTAGGCAAGATTGCTGTAGATATTACAACAGCATTTGAGGACTTTAAGGTTTCTGTCTTGGAAGATGTTGGTTCCCCATCAATATCCGACATCAATCTGAAGCTTTTGTATGAAGAGTTATTAGAGAGAGCTAAGGAAAAGGAGGAGAAAGAAGCTAAGAAACGTCAACGCCTTGCTGACGAATTTACTAAGTTGTTATATACATTCAAGGATATTACTGCTTCTTCAAAATGGGAGGATTGCAAGCCACTTTTTGAGGAGGCACAAGAGTACAgTGATGGCACTTCTTCATTAGATAATCTCTTCCTGCTTTCAAgcGACTTTTGCTTCTTGCAATTGACTGTACTGTCAATAGATTTGgccaaaaaagagaaagaaagagaggaaaaagataaacggaaggagaaggagaaaaaagagaaggaaagagaaCGTGACAAAGAAAAGTCTAAGGAACGTCATAAGAAGGATGAAACTGATAGTGAAAACCTAGACATAAGTGACAGTTATGGTTACAAAGAGgacaagaaaaaggaaaaggacaAAGAAAGGAAGCATCGTAAGAGGCATCAGAGCAGTACAGAGGATGCAGATTCTGAAAAGGCAGAGAAGGAGGAATCAAAGAAATCAAGGAGGCATGGCAGTGACCGCAAGAAGTCCAGAAAGCATGCAAACTCTCCTGAATCAGAAACTGAAGCTCGGCATAGAAGACACAAGCGGGATCACAGGGATGGTTACAGGAAAACTGGTGGGCTTGAGGAACTTGAAGatggggagcttggtgaagATGGAGAGATTGAGTACATGCAAACTCGCCTGAATCAGAAAATGAAGCTTGGCATAAAAGATACAAGAGGATCGAGGGATCACTGGGATGGTTACAGGAAAACTGGTGAGAatggggagcttggtgaagATGGAGAGATTGAGGAGTTTGTTGTTAATCTTTACATAGTTGAGATAGAAGAACTTAACCAGCGTCTTAAGGATGATGTTAACTTTCATTATCAATATATTAGAAGCATGGAAGTGCGAGTGCCTCAACCATTTACATATAGTTCACCTTGGCTCTTTATTTCAGCAGTGCTTTGTCGATATGGTTAA 3918 0.4012 MASNSQPSNMQPLRPPSVGSLGPQSVGSPLSMQFRPVIPAQQGQPFAPTTSQQFGPVGQGISSSNVGMPVVQSQQLQYSQPMQQLNPRPIQPGHGAPYIQTNRPMVSAPLHSQQTVPHLGNHMPGLGVSGAPPHSSYTFTHPYGQQQDNVNALAQYQPPHQMNAPPGGQPWMSSVSQSTASVTPVHHAAVQSSGTTSADAATTGSSQNSSSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIEVSFGDLLLLLYHGKSGEILTTALYGHCEGLHFLKAGNSLLFTRADASTVWKEFTSPEGRKYYFNKVTQQSTWTIPEDLKVCDYYVIVFWIFERLHQISHSKLQISSQLAREQAQKASNTGMKPETSDASNVADVSLAATSTAANAAGSITSMTSTGVATSPVPVTPIVTTTDPRVVSGLPTIPISHSTITSSASGVEASTVTTLDAVPTVVALRSGVAANSQDSSAPSMYRYALPYSFVENQALQDVFTSANGASQQDMEVLFICCLELLDYLSQGKSEEFGDFYCACEALGINIHKLMHANFVSNAVYALSTDKEAKRGMAVAGKTNVTPPEEKANDDEPLVYANKLEAKNAFKALLESANVQSDWTWEQAMREIINDKRYSALKTLGERKQAFNEVRNKPLAHFRNKLVDFQFASSELDLCCNYLGQRKKLEAEERRMRQKRAREEFSKMLEECKELTSSTRWRHVSTSLIMMFFSCKAVTMFENDERFKAVERARDREDLFESYMVELERKILGKAYCSATDGCVLILEKENAAEEHRRNIAEFRKFLESCDFVKVYSPWRKVQDRLEDDERCTRLEKIDRLLVFQDYIRELEKEEEEQKRIQKEQLRRTERKNRDAFRKLLEEHVASGILTAKTHWREYCMMVKGLPQYQAVASNTSGSTPRDLFEDATEDLEKKYHEDKARVKDAVKLGKIAVDITTAFEDFKVSVLEDVGSPSISDINLKLLYEELLERAKEKEEKEAKKRQRLADEFTKLLYTFKDITASSKWEDCKPLFEEAQEYSDGTSSLDNLFLLSSDFCFLQLTVLSIDLAKKEKEREEKDKRKEKEKKEKERERDKEKSKERHKKDETDSENLDISDSYGYKEDKKKEKDKERKHRKRHQSSTEDADSEKAEKEESKKSRRHGSDRKKSRKHANSPESETEARHRRHKRDHRDGYRKTGGLEELEDGELGEDGEIEYMQTRLNQKMKLGIKDTRGSRDHWDGYRKTGENGELGEDGEIEEFVVNLYIVEIEELNQRLKDDVNFHYQYIRSMEVRVPQPFTYSSPWLFISAVLCRYG 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3476 1305 ProSiteProfiles FF domain profile. 858 921 IPR002713 -
Sto9g3476 1305 ProSiteProfiles WW/rsp5/WWP domain profile. 207 240 IPR001202 GO:0005515
Sto9g3476 1305 Gene3D FF domain 593 645 IPR036517 -
Sto9g3476 1305 MobiDBLite consensus disorder prediction 1126 1150 - -
Sto9g3476 1305 Gene3D FF domain 986 1038 IPR036517 -
Sto9g3476 1305 Gene3D FF domain 851 932 IPR036517 -
Sto9g3476 1305 Gene3D FF domain 777 850 IPR036517 -
Sto9g3476 1305 ProSitePatterns WW/rsp5/WWP domain signature. 213 238 IPR001202 GO:0005515
Sto9g3476 1305 Gene3D - 290 326 - -
Sto9g3476 1305 Gene3D - 205 248 - -
Sto9g3476 1305 SUPERFAMILY WW domain 289 324 IPR036020 GO:0005515
Sto9g3476 1305 ProSiteProfiles FF domain profile. 688 756 IPR002713 -
Sto9g3476 1305 ProSiteProfiles FF domain profile. 593 647 IPR002713 -
Sto9g3476 1305 Pfam WW domain 296 321 IPR001202 GO:0005515
Sto9g3476 1305 Pfam WW domain 211 238 IPR001202 GO:0005515
Sto9g3476 1305 Coils Coil 1056 1096 - -
Sto9g3476 1305 SUPERFAMILY FF domain 853 928 IPR036517 -
Sto9g3476 1305 MobiDBLite consensus disorder prediction 1 61 - -
Sto9g3476 1305 Gene3D FF domain 684 759 IPR036517 -
Sto9g3476 1305 SUPERFAMILY FF domain 986 1031 IPR036517 -
Sto9g3476 1305 SUPERFAMILY WW domain 212 246 IPR036020 GO:0005515
Sto9g3476 1305 CDD WW 211 240 IPR001202 GO:0005515
Sto9g3476 1305 MobiDBLite consensus disorder prediction 1 15 - -
Sto9g3476 1305 ProSiteProfiles FF domain profile. 786 840 IPR002713 -
Sto9g3476 1305 ProSiteProfiles WW/rsp5/WWP domain profile. 290 323 IPR001202 GO:0005515
Sto9g3476 1305 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 671 1199 IPR039726 GO:0045292
Sto9g3476 1305 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 4 326 IPR039726 GO:0045292
Sto9g3476 1305 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 353 644 IPR039726 GO:0045292
Sto9g3476 1305 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 4 326 - -
Sto9g3476 1305 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 671 1199 - -
Sto9g3476 1305 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 353 644 - -
Sto9g3476 1305 MobiDBLite consensus disorder prediction 1062 1201 - -
Sto9g3476 1305 SUPERFAMILY FF domain 682 760 IPR036517 -
Sto9g3476 1305 SMART ww_5 208 240 IPR001202 GO:0005515
Sto9g3476 1305 SMART ww_5 291 323 IPR001202 GO:0005515
Sto9g3476 1305 MobiDBLite consensus disorder prediction 167 215 - -
Sto9g3476 1305 SUPERFAMILY FF domain 585 643 IPR036517 -
Sto9g3476 1305 MobiDBLite consensus disorder prediction 1062 1119 - -
Sto9g3476 1305 MobiDBLite consensus disorder prediction 116 143 - -
Sto9g3476 1305 MobiDBLite consensus disorder prediction 21 61 - -
Sto9g3476 1305 Pfam FF domain 789 837 IPR002713 -
Sto9g3476 1305 Pfam FF domain 690 753 IPR002713 -
Sto9g3476 1305 Pfam FF domain 862 917 IPR002713 -
Sto9g3476 1305 Pfam FF domain 595 643 IPR002713 -
Sto9g3476 1305 MobiDBLite consensus disorder prediction 157 217 - -
Sto9g3476 1305 MobiDBLite consensus disorder prediction 1159 1175 - -
Sto9g3476 1305 ProSitePatterns WW/rsp5/WWP domain signature. 296 321 IPR001202 GO:0005515
Sto9g3476 1305 Coils Coil 975 999 - -
Sto9g3476 1305 Coils Coil 834 862 - -
Sto9g3476 1305 SUPERFAMILY FF domain 778 847 IPR036517 -
Sto9g3476 1305 CDD WW 296 323 IPR001202 GO:0005515
Sto9g3476 1305 SMART FF_2 860 921 IPR002713 -
Sto9g3476 1305 SMART FF_2 688 756 IPR002713 -
Sto9g3476 1305 SMART FF_2 593 647 IPR002713 -
Sto9g3476 1305 SMART FF_2 786 840 IPR002713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3476 Sto-Chr9 34103941 34118036 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3476 K12821 - gmx:100806019 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3476 9 34103941 34118036 Sto9g3476 9 34103941 34118036 ECH