Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3465 ATGGGATGGGATTTGGGAAATTTGGTGGCCAAAGGAATGGATCAAGACCGTAGAAAAATTGGTATGTTAGATGGTCTCAAAATCCTACGTGGCAATATTGATGCATTCAGAATGGGAGCCTACCCAGGCGAAGCTTTTCTTCTTCCCACTCCCTATTACCCTGGATTTGATAGAGATCTCAAGTGGCGTACTGGGGTTGAAATCGTTCCAATACATTGCTCAAGCTCAAATGGCTTCAGAATAAGCTCCTCTGCTTTAGAAGAGGCCTATCAACAAGCCCGAACACACAATCTAAAAGTTAAAGGAGTGCTAATAACAAACCCCTCCAACCCTCTAGGCATAACCATGACTAGAACCGAGCTTTCCCATCTCATCCATTTTGCAATTGACAAGAACATCCATATAATAAGCGATGAAATTTATTCGGGGACAGTGTTCGACTCTCCCACATTTGTAAGCATCATGGAGGTGGCAAATGAGAAAATCCAACAAGACGCTGGGATTTGGAATCGCATTCACATTGTGTATAGTCTGTCCAAAGACCTTGGCGTCCCTGGATTTCGTGTAGGAATGATATATTCCAATAATCAAATGGTTGTAGGTGCAGCGACCAAAATGTCAAGCTTTGGATTGGTTTCTTCTCAAACTCAGTATTTGCTGGCCAACTTACTATCTGACAAGAAATTCACAGAGGAGTACATGAAGGAGACTGCGAGGAGActgaaaaagagaaaggaaaagctTGTCTGTGGGTTGAGAAATGCAGGGATTGGGTGTTTGAAGAGCAATGCTGGGCTGTTCTGCTGGGTGGACATGAGGCATCTGTTAAGCTCACTCACTTTTGAAGCAGAGAAGGAGCTGTGGAGGAGGATTGTTAGGGAGGTTGGTTTGAACATATCTCCTGGTTCATCTTGCCACTGCTCTGAAGCAGGATGGTTCAGAGTTTGCTTTGCCAACATGTCAGAACAAACATTGCAAGTTGCAATGCGACGGATGAAGCTTTTCACAGATTCAGCTCTCTCTTCTGTCCGCCCTACCACAGATACTACAACAAGGTCACTTCCCAGGTGGATTTCCCACACCCAATTATCATCCCATGACTGGGAATTCAATActagttaa 1122 0.4323 MGWDLGNLVAKGMDQDRRKIGMLDGLKILRGNIDAFRMGAYPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFRISSSALEEAYQQARTHNLKVKGVLITNPSNPLGITMTRTELSHLIHFAIDKNIHIISDEIYSGTVFDSPTFVSIMEVANEKIQQDAGIWNRIHIVYSLSKDLGVPGFRVGMIYSNNQMVVGAATKMSSFGLVSSQTQYLLANLLSDKKFTEEYMKETARRLKKRKEKLVCGLRNAGIGCLKSNAGLFCWVDMRHLLSSLTFEAEKELWRRIVREVGLNISPGSSCHCSEAGWFRVCFANMSEQTLQVAMRRMKLFTDSALSSVRPTTDTTTRSLPRWISHTQLSSHDWEFNTS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3465 373 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11 40 347 - -
Sto9g3465 373 SUPERFAMILY PLP-dependent transferases 36 333 IPR015424 -
Sto9g3465 373 Gene3D - 30 212 IPR015421 GO:0003824
Sto9g3465 373 CDD AAT_like 42 333 - -
Sto9g3465 373 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 177 190 IPR004838 GO:0003824|GO:0009058|GO:0030170
Sto9g3465 373 Gene3D Aspartate Aminotransferase, domain 1 213 333 IPR015422 GO:0003824
Sto9g3465 373 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 43 64 - -
Sto9g3465 373 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 97 121 - -
Sto9g3465 373 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 133 156 - -
Sto9g3465 373 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 171 195 - -
Sto9g3465 373 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 203 226 - -
Sto9g3465 373 Pfam Aminotransferase class I and II 35 331 IPR004839 GO:0009058|GO:0030170
Sto9g3465 373 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 40 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3465 Sto-Chr9 34030973 34035117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3465 K01762 - gmx:100789346 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3465 9 34030973 34035117 Sto9g3465 9 34030973 34035117 ECH