Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3462 ATGGCCTTGAGAGTGTTTGACCCACAGTGCTTGTGGATTGAAGGAAGCTCTCCACGCTTGTTTTGCAAGGTAAGGAGGCGCACGAAGGTAGCGTGGGATTTGGCAATTGCCATGCTGGTAGCGAGGATTGGAAAGATTTTGGGGATATGGACTGACGTGGATATTAGTGAAGATGAATACGCTAATGTGGAGTGGGATGGTCTGGGATTTGGACTGGTACCAACGGACTACATGTACATGAACACGTGCAGAGGGGACCAGCAATTCGGAGAAGGACAGGTCAGTGTTTTCGGGAACATTCAAGTGAGCCCATCAGCTGGAGTTCTGAACTACGGACAAGGACTATTTGAAGGCACAAAGGCATACAGAAAAGAGAATGGACACCTGCTCCTGTTCCGTCCTCAAGAGAATGCGATTCGGATGCAGATTGGTGCGGAAAGAATGTGCATGCCATCGCCTTCTGTGGATCAATTTGTGGATGCTTTAAAGCAAACTGCCTTGGCCAATAGACGCTGGGTTCCTCCTGCTGGGAAAGGATCCTTGTACCTTAGGCCCTTGCTCATAGGGACGGGTCCTGTATTGGGTTTGGCTCCAGCCCCAGAGTATACATTCCTCGTATATGCTTCCCCTGTTGCCAACTATTTCAAAGAGGGTACTGCACCCCTTAACTTGTACGTGGAGGAGGAATTTGACCGTGCTTCTCGTCGCGGAACCGGAAGCGTCAAAACCATTTCTAATTATGCTCCCgtGTTGAAGGCACAAATGAGAGCGAAGACGAGAGGGTTCTCAGATGTGTTATACCTGGACTCCGCCACTAAGAAATATGTGGAGGAAGTATCTTCTTGTAACATATTCATAGCTAAGGGTAAACGCATCACGACACCCGCTACCAATGGAACAATTCTTGCTGGAATTACCAGAAAAAGTGTAATTGAAATTGCTCAAGATCATGGTTACGAGGTAGAGGAGCGTGGTGTTGCGGTGGATGAATTAGCGGAGGCTGATGAAGTTTTCTGCACTGGAACTGCCGTTGGTGTTGCTCCCGTGGGGACTATCACATATGGGGCTAAAAGGATGGAATATAAAACAGGTAGAGCAACTATTTGTCAAGAACTGCACTCCACTCTTTCTGGAATTCAAACCGGCACCATTCAAGATAACAAGGGATGGGTCCTTGAGATTTACTAA 1188 0.4764 MALRVFDPQCLWIEGSSPRLFCKVRRRTKVAWDLAIAMLVARIGKILGIWTDVDISEDEYANVEWDGLGFGLVPTDYMYMNTCRGDQQFGEGQVSVFGNIQVSPSAGVLNYGQGLFEGTKAYRKENGHLLLFRPQENAIRMQIGAERMCMPSPSVDQFVDALKQTALANRRWVPPAGKGSLYLRPLLIGTGPVLGLAPAPEYTFLVYASPVANYFKEGTAPLNLYVEEEFDRASRRGTGSVKTISNYAPVLKAQMRAKTRGFSDVLYLDSATKKYVEEVSSCNIFIAKGKRITTPATNGTILAGITRKSVIEIAQDHGYEVEERGVAVDELAEADEVFCTGTAVGVAPVGTITYGAKRMEYKTGRATICQELHSTLSGIQTGTIQDNKGWVLEIY 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3462 395 CDD BCAT_beta_family 101 382 IPR033939 GO:0004084|GO:0009081
Sto9g3462 395 ProSitePatterns Aminotransferases class-IV signature. 278 307 IPR018300 GO:0003824
Sto9g3462 395 Gene3D - 49 222 IPR043131 -
Sto9g3462 395 Pfam Amino-transferase class IV 114 351 IPR001544 GO:0003824
Sto9g3462 395 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 91 394 IPR005786 GO:0004084|GO:0009081
Sto9g3462 395 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 56 391 IPR036038 GO:0003824
Sto9g3462 395 Gene3D - 223 394 IPR043132 -
Sto9g3462 395 PIRSF BCAT1 51 395 IPR005786 GO:0004084|GO:0009081
Sto9g3462 395 PANTHER AMINO ACID AMINOTRANSFERASE 55 394 IPR005786 GO:0004084|GO:0009081
Sto9g3462 395 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 55 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3462 Sto-Chr9 34014413 34018855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3462 K00826 - gmx:100782644 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3462 9 34014413 34018855 Sto9g3462 9 34014413 34018855 ECH