Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3459 ATGGATCGCTTTCCGATCGcaatcttcctcttcctccttgcACTCCCCTCTGCTCTGGTAGATGCACGTCGAGACGTCGATGGAGGATTTATCCGATTGCCCTCGGAAGTTTCCAGGTTCTTCCACGGAGGAGCGACGGAGGAGAGTAACCAAAAGGTTGAGGCTGAGGGGACGAGGTGGGCTATCTTACTTGCTGGTTCCAACGGCTATTGGAATTACAGGCACCAGGCTGATATTTGTCATGCGTATCAACTACTGAGGAAAGGTGGTCTGAAAGAGGAAAATATTGTTGTTTTTATGTATGATGACATTGCTTACAATGAAGAGAACCCAAGGCCTGGAACTATCATTAACAGCCCAAATGGGGAGGACGTTTATAAAGGAGTCCCAAAGGATTACACCGGTGAAGAGGTTAATGTTGACAACTTTTATGCCGTTATACTTGGAAATAAGACAGCTCTTACAGGTGGCAGTGGGAAGGTTGTGGATAGTGGTCCCAAtgatcatatatttatattctaCTCTGATCATGGGGGTGCAGGAGTGCTTGGGATGCCTACTTATCCTTACTTATATGCAAATGATCTGAATGAAGTCTTGAAAAAGAAGCATGCTTCTGGAATGTATAAAAGCCTAGTATTTTATCTTGAGGCATGTGAATCTGGGAGTATTTTTGAAGGCCTTCTTCCTGAAGGTTTGAATATTTATGCTACAACAGCTTCAAATGCAGAAGAAAGCAGTTGGGGAACATATTGTCCTGGAGAGTATCCTAGCCCACCCCCAGAATATGAAACTTGCTTAGGTGACCTCTACAGTGTTTCCTGGATGGAAGACAGTGACATACACAATTTGCGAACAGAAACATTGCATCAACAATATGAACTGGTTAAGAGAAGGACTCTTAATGGAAATTCTTATTCAGGCTATGGCTCTCACGTGATGCAATATGGTGATATAGGGATTAGCAAGAATAATGTTGAGATATATTTGGGAACAAATCCTGCTAATGATAATTACACTTTTGTGGATGAAAACTCCCTTAGGCCACCTACAAAAGCAACCAACCAACGTGATGCTGATCTCATCCATTTTTGGGAGAAGgatatatttcataatttaagATTACCAGAATCTCTTAGTGGAACATTAGGATCAGGGGCGAACAACGAGGATTACCGCAAAGCTCCCGAGGGTTCCCCTAGGAAGTCTGAAGCTCAGAAACAAGTTTTGGAAGCTATGTCTCACAGAATGCATTTAGACAACAGCGTGAAACTTGTTGGAAAGCTGTTATTTGGCATTGGAAAGGGTCCAGAAGTGCTCAACACTGTTCGTGCTGCTGGCAAACCACTTGTTGATGACTGGGACTGCTTGAAAACGATGGTTAGGACTTTTGAGACATATTGTGGATCCCTGTCTCAGTATGGGATGAAACACATGAGGTCCTTTGCAAACATGTGCAACGCTGGAATAAAAACCCAGCAAATGGTAGAGGCCTCGGCACAAGCATGCGCCAGTGTTCCTGCCACTCCCTGGAGTTCTCTGCACAAGGGTTTCAGTGCATAA 1563 0.4261 MDRFPIAIFLFLLALPSALVDARRDVDGGFIRLPSEVSRFFHGGATEESNQKVEAEGTRWAILLAGSNGYWNYRHQADICHAYQLLRKGGLKEENIVVFMYDDIAYNEENPRPGTIINSPNGEDVYKGVPKDYTGEEVNVDNFYAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGAGVLGMPTYPYLYANDLNEVLKKKHASGMYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEYPSPPPEYETCLGDLYSVSWMEDSDIHNLRTETLHQQYELVKRRTLNGNSYSGYGSHVMQYGDIGISKNNVEIYLGTNPANDNYTFVDENSLRPPTKATNQRDADLIHFWEKDIFHNLRLPESLSGTLGSGANNEDYRKAPEGSPRKSEAQKQVLEAMSHRMHLDNSVKLVGKLLFGIGKGPEVLNTVRAAGKPLVDDWDCLKTMVRTFETYCGSLSQYGMKHMRSFANMCNAGIKTQQMVEASAQACASVPATPWSSLHKGFSA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3459 520 MobiDBLite consensus disorder prediction 381 405 - -
Sto9g3459 520 PIRSF Legumain 387 520 IPR001096 GO:0006508|GO:0008233
Sto9g3459 520 PIRSF Legumain 7 375 IPR001096 GO:0006508|GO:0008233
Sto9g3459 520 PANTHER VACUOLAR-PROCESSING ENZYME 1 367 - -
Sto9g3459 520 PANTHER VACUOLAR-PROCESSING ENZYME 391 519 - -
Sto9g3459 520 Gene3D - 388 508 IPR046427 -
Sto9g3459 520 PRINTS Hemoglobinase (C13) cysteine protease signature 60 84 IPR001096 GO:0006508|GO:0008233
Sto9g3459 520 PRINTS Hemoglobinase (C13) cysteine protease signature 85 114 IPR001096 GO:0006508|GO:0008233
Sto9g3459 520 PRINTS Hemoglobinase (C13) cysteine protease signature 132 147 IPR001096 GO:0006508|GO:0008233
Sto9g3459 520 PRINTS Hemoglobinase (C13) cysteine protease signature 160 179 IPR001096 GO:0006508|GO:0008233
Sto9g3459 520 PRINTS Hemoglobinase (C13) cysteine protease signature 209 225 IPR001096 GO:0006508|GO:0008233
Sto9g3459 520 PIRSF AE 2 520 IPR043577 GO:0004197|GO:0051603
Sto9g3459 520 Gene3D - 57 355 - -
Sto9g3459 520 Pfam Peptidase C13 family 59 331 IPR001096 GO:0006508|GO:0008233
Sto9g3459 520 PANTHER HEMOGLOBINASE FAMILY MEMBER 391 519 IPR001096 GO:0006508|GO:0008233
Sto9g3459 520 PANTHER HEMOGLOBINASE FAMILY MEMBER 1 367 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3459 Sto-Chr9 33988254 33992527 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3459 K01369 - tcc:18588032 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3459 9 33988254 33992527 Sto9g3459 9 33988254 33992527 ECH