Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3409 ATGGGTACTGAGGCTCCCCACGTTTTCTACCTCAATGCCTTCCCAAAGTTTCCTCATATTCAAACCCAACAAAACATAACCAATGACAATGACCACAATCATGATTCTTCCACCTGGTACGAAGAAGTCCTCGATCATGATCTCAAATGGTCTTTTGCACTCAATAGTGTGCTCCATAAAGGGATTAGCGAGTACCAGGAGATAGCTCTCTTGGACACCAAGCGTTTCGGAAAGGCCTTGGTGATTGATGGGAAGATGCAGAGTGCCGAAATGGATGAATTCGTTTATCACGAATGCTTGATTCATCCTGCTCTCCTATGCCACCCTGACCCCAAAACGGTGTTTATAATGGGAGGTGGCGAAGGCTCTGCTGCCAGAGAAGCACTAAAGCACAAATCAATGAAGAGAGTGGTGATGTGTGATATAGACCAGGAGGTGGTAGATTTTTGCCGAGCACACTTGACTGTAAATAGGGAGGCCTTTTCTCATAAGAAGCTTGACCTTATCATCAATGATGCCAAGGCTGAATTACAGAACAGGAACGAGAAGTTCGACATCATTGTTGGAGACTTGGCAGACCCAGTTGAAGGAGGGCCTTGCTACCAGCTGTATACTAAATCCTTCTATGAGAAAATACTGAAGCCTAAGCTCAGTGAGAAAGGCATTTTTGTGACTCAGGCTGGACCCGCGGGCATCTTCACCCACAAGGAGGTTTTCACTTCAATATATAACACAATCAAACAGGTCTTTAAATATGTCATGGCATACACAACTCATGTACCATCTTTTGCTGATACTTGGGGATGGGTCATGGCTTCTGACCAGCCATTCCTGATTGGTGCTGAGGAAATGGACAAAAGAATTGAAGGAAGAATAGATGGGGATCTGCTATATCTGAATGGCGCTTGGTTCCAGTCATCCGCCACCATGAATAAGACTGTTTCACAATCGTAA 954 0.4486 MGTEAPHVFYLNAFPKFPHIQTQQNITNDNDHNHDSSTWYEEVLDHDLKWSFALNSVLHKGISEYQEIALLDTKRFGKALVIDGKMQSAEMDEFVYHECLIHPALLCHPDPKTVFIMGGGEGSAAREALKHKSMKRVVMCDIDQEVVDFCRAHLTVNREAFSHKKLDLIINDAKAELQNRNEKFDIIVGDLADPVEGGPCYQLYTKSFYEKILKPKLSEKGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVMAYTTHVPSFADTWGWVMASDQPFLIGAEEMDKRIEGRIDGDLLYLNGAWFQSSATMNKTVSQS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3409 317 Pfam Spermine/spermidine synthase domain 93 270 - -
Sto9g3409 317 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 4 315 - -
Sto9g3409 317 PANTHER BNAA02G04280D PROTEIN 4 315 - -
Sto9g3409 317 CDD AdoMet_MTases 118 226 - -
Sto9g3409 317 Gene3D Spermidine synthase, tetramerisation domain 37 89 IPR037163 -
Sto9g3409 317 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 38 314 IPR029063 -
Sto9g3409 317 Gene3D Vaccinia Virus protein VP39 90 317 IPR029063 -
Sto9g3409 317 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 37 274 IPR030374 -
Sto9g3409 317 Hamap Polyamine aminopropyltransferase [speE]. 38 315 IPR001045 GO:0003824
Sto9g3409 317 Pfam Spermidine synthase tetramerisation domain 39 90 IPR035246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3409 Sto-Chr9 33746611 33748624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3409 K18787 - gmx:100815510 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3409 9 33746611 33748624 Sto9g3409 9 33746611 33748624 ECH