Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3402 ATGCTATCTTTTGTAACAGAAAGTATGGGCTTACTCTGCAGCAAAAATCATCGTTataatgatgctgatgctgAAGAAAATGCACAGGCTGCCGAAATTGAAAAAAGAATAGAGCTAGAAACAAAGGCTGAAAAGCATATTCAGAAACTTCTACTACTTGGTGCTGGGGAGTCGGGGAAGTCCACAATCTTTAAGCAGATAAAACTCTTATTTCAAACTGGCTTTGATGAGGCAGAGCTCAAAAGCTACATACCAGTCATTCATGCTAATGTGTATCAGACAATAAAAATTCTGCATGATGGGTCAAAGGAAATAGCTCAAAATGAAACTGAGTCTTCAAAGTATGTGATCTCCAACGAAAACAAGGATATTGGAGAGAAACTATCAGAAATTGGAGGCAGGCTGGATTACCCACGTCTCACCAAGGAACTTGCGCAGGAAATAGAGACTCTATGGAATGATGCTGCTATTCAGGAAACATATGTCCGTGGTAATGAGCTCCAAGTTCCAGATTGTGCCAACTATTTCATGGAAAATTTGCAGAGGTTGTCTGATGCTAATTATGTTCCAACAAAGGAGGATGTTCTGTATGCAAGAGTTCGTACCACTGGTGTCGTAGAGATCCAGTTCAGCCCAGTTGGAGAAAACAAGAAAAGTGGGGAGGTATATAGGCTTTTTGATGTTGGAGGCCAGAGAAATGAGAGGAGAAAATGGATTCATCTGTTTGAAGGAGTTACAGCTGTAATATTCTGTGCTGCTATCAGCGAGTATGGTgaacCTAAAGTGTTGACCTCACATATGCCTTCCAGGTATGATCAAACACTTTTTGAGGATGAAAACAAGAACAGAATGATGGAGACTAAGGAACTTTTTGAGTGGGTCCTAAAGCAACCATGTTTTGAGAAAACATCCTtcatgttatttttaaataagtttgaCATATTCGAGAAGAAGATCCTAAAAGTCCCACTTAATGCATGCGAATGGTTCAAAGATTACCAGCCAGTTTCCTCAGGGAAACAAGAGATTGAGCATGCATATGAGTTTGTGAAGAAAAAATTTGAGGAATTGTATTTTCAGAGCACTGCTCCTGATCGAGTAGATCGTGTCTTTAAGATCTATCGGACCACTGCCCTTGATCAGAAGCTTGTGAAGAAGACTTTCAAGCTTGTTGATGAGTCTTTGAGGCGGAGGAATCTCTTTGAAGCTGGCTTATTATGA 1221 0.3898 MLSFVTESMGLLCSKNHRYNDADAEENAQAAEIEKRIELETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYIPVIHANVYQTIKILHDGSKEIAQNETESSKYVISNENKDIGEKLSEIGGRLDYPRLTKELAQEIETLWNDAAIQETYVRGNELQVPDCANYFMENLQRLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYGEPKVLTSHMPSRYDQTLFEDENKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNACEWFKDYQPVSSGKQEIEHAYEFVKKKFEELYFQSTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDESLRRRNLFEAGLL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3402 406 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT 9 406 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto9g3402 406 Pfam G-protein alpha subunit 30 393 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto9g3402 406 Gene3D - 76 201 IPR011025 GO:0007165
Sto9g3402 406 SMART galpha_1 27 405 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto9g3402 406 CDD G-alpha 48 400 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto9g3402 406 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 9 406 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto9g3402 406 SUPERFAMILY Transducin (alpha subunit), insertion domain 75 200 IPR011025 GO:0007165
Sto9g3402 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 403 IPR027417 -
Sto9g3402 406 PRINTS Plant G protein alpha subunit signature 35 44 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto9g3402 406 PRINTS Plant G protein alpha subunit signature 85 98 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto9g3402 406 PRINTS Plant G protein alpha subunit signature 100 114 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto9g3402 406 PRINTS Plant G protein alpha subunit signature 124 138 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto9g3402 406 PRINTS Plant G protein alpha subunit signature 341 356 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto9g3402 406 PRINTS Plant G protein alpha subunit signature 358 370 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto9g3402 406 PRINTS Alpha G protein (transducin) signature 49 64 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto9g3402 406 PRINTS Alpha G protein (transducin) signature 188 210 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto9g3402 406 PRINTS Alpha G protein (transducin) signature 223 240 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto9g3402 406 PRINTS Alpha G protein (transducin) signature 245 273 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto9g3402 406 PRINTS Alpha G protein (transducin) signature 305 314 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto9g3402 406 Gene3D - 49 393 IPR027417 -
Sto9g3402 406 ProSiteProfiles G-alpha domain profile. 46 406 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3402 Sto-Chr9 33691706 33695428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3402 K19729 - rcu:8258599 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3402 9 33691706 33695428 Sto9g3402 9 33691706 33695428 ECH