Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3401 ATGGCGACTTCAGTGGCAGTCGCCGGTGCTCTCACGGCGAACGATCGCCAGATTCTGACGGCGGTGAACGCCGCAGCGTCCAGCCTTTCATTTCTCGGCTCGGGATTCATTGTACTCTGCTACGCCCTGTTCAAGGAGCTACGCAAGTTTTCCTTCAAGCTCGTTTTCTACCTCGCCCTCTCTGACATGCTCTGCAGCTTCTTCAACATAGTAGGGGACCCATCCAAAGGTTTCTTTTGTTATGCTCAGGGATATAGCACACATTTCTTTTGTGTAGCTTCTTTCCTTTGGACTACAACTATTGCTTTTACCCTTCATCGAACTGTTGTAAGGCACAAAACAGAtgttgaagatttggaggccaTGTTTCACCTGTATGTTTGGGGACAGTCTTACGCTCCTTTGGTAATGACCATAAACATTTTGATGCATGGTGTTGGACTCAAACAGATCGCACAAGGAAGGCAAGTATTTGCAGGATGGCTAACTTATGttgtttttGTAATTCATTTTGTAACATTTTACATGCCACTCTGGGGTGCAATTCTTTATAACGGATTTACATACTTTCAAGTTATAAGAATGCTGAACAATGCAACCCGTATGGCAATTGGTATGTCAGACCGAGCTCATCTCTCAGATGCAGATGCTAGAGATAACACGAAGGCTCTAAATCGATGGGGGTACTATCCACTGATTCTAATAGGATCATGGGCTTTTGGAACTATCAACCGTATACATGATTTTGTTGAACCTGGCCATAAAATCTTTTGGCTTTCATTTCTTGATGTTGGAATGGCTGCTCTCATGGGCCTCTTCAACTCAATAGCATATGGTCTCAATGCTTCTGTTCGTCGGGCTATTTGTGAAAGATTGGACACGTTCTGGCCAGAGGGACTTCCAATATGGCTCAACTATCTTAAGTACAAGAATCAACAGCAAGAAAGTGAACTAGTCTCATTAATAGCTGAAGATCAACGATAG 984 0.4268 MATSVAVAGALTANDRQILTAVNAAASSLSFLGSGFIVLCYALFKELRKFSFKLVFYLALSDMLCSFFNIVGDPSKGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVRHKTDVEDLEAMFHLYVWGQSYAPLVMTINILMHGVGLKQIAQGRQVFAGWLTYVVFVIHFVTFYMPLWGAILYNGFTYFQVIRMLNNATRMAIGMSDRAHLSDADARDNTKALNRWGYYPLILIGSWAFGTINRIHDFVEPGHKIFWLSFLDVGMAALMGLFNSIAYGLNASVRRAICERLDTFWPEGLPIWLNYLKYKNQQQESELVSLIAEDQR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3401 327 PANTHER TRANSMEMBRANE PROTEIN 116 10 292 - -
Sto9g3401 327 Pfam Slime mold cyclic AMP receptor 15 282 - -
Sto9g3401 327 PRINTS GCR1-cAMP receptor family signature 30 48 IPR022343 -
Sto9g3401 327 PRINTS GCR1-cAMP receptor family signature 49 64 IPR022343 -
Sto9g3401 327 PRINTS GCR1-cAMP receptor family signature 80 98 IPR022343 -
Sto9g3401 327 PRINTS GCR1-cAMP receptor family signature 230 248 IPR022343 -
Sto9g3401 327 PRINTS GCR1-cAMP receptor family signature 262 281 IPR022343 -
Sto9g3401 327 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 10 292 - -
Sto9g3401 327 SUPERFAMILY Family A G protein-coupled receptor-like 16 289 - -
Sto9g3401 327 Gene3D - 10 299 - -
Sto9g3401 327 PRINTS Putative plant GPCR, GCR1, signature 19 34 IPR022340 -
Sto9g3401 327 PRINTS Putative plant GPCR, GCR1, signature 36 50 IPR022340 -
Sto9g3401 327 PRINTS Putative plant GPCR, GCR1, signature 52 74 IPR022340 -
Sto9g3401 327 PRINTS Putative plant GPCR, GCR1, signature 82 95 IPR022340 -
Sto9g3401 327 PRINTS Putative plant GPCR, GCR1, signature 166 178 IPR022340 -
Sto9g3401 327 PRINTS Putative plant GPCR, GCR1, signature 179 202 IPR022340 -
Sto9g3401 327 PRINTS Putative plant GPCR, GCR1, signature 224 245 IPR022340 -
Sto9g3401 327 PRINTS Putative plant GPCR, GCR1, signature 254 271 IPR022340 -
Sto9g3401 327 PRINTS Putative plant GPCR, GCR1, signature 272 288 IPR022340 -
Sto9g3401 327 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 19 282 IPR017981 GO:0004888|GO:0007166|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3401 Sto-Chr9 33680188 33684678 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3401 K22987 - gmx:100794547 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3401 9 33680188 33684678 Sto9g3401 9 33680188 33684678 ECH