Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3397 ATGAGCTTAATTCAGAAAGGATCGCAAACCGATGCAAAGCTAAGTTCCCCAAATAAGGTAACCACTTTGAATCCAAATGCAGCCGAGTTTATTCCTTTTTCCCTCAGATCATTGCCATCTGGAAGTACCAGCTCGGTAGATGCAACAAGGTTCACTACTTCCGGAGCTCTTGGAAAAGCAGTTTTAGATCGATCAGAGTCATCCGTTTCAAATAATTCTGATGATGAGGTCCACAAATACTGGCGTTGTCAGCTCCCCGATGATATCACCCCTGACTTTAAGGTCATGGGAGAAGACGAACCACAGGGTCTTAACAACCTCTCTTTAGCGGGCTTATCCATACATGATGATCATGATTCATCAAGGGAGGATCTGTCTTCGGCAAGCTTTCTGAACTCATTAACAAAGCCTTGGGATGTGCAAATTGGGAATACCAACCAGCATATTAGCAGTGGCCAAGAGGGGCTTGCTTATGATGAAAACTCTGGACATGGATTCTTAAATGATCTTCTGGGCGAGCAAGCTATAGTGGATGGTGTGGATATGAACCCTTTGGAGTTCTTGGCATCTCAATTCCCTGGTTTTGCTTCTGAAAGCCTTGCTGAAGTTTATTTTGCCAATGGGGGTGATTTAAATCTGACCATTGAGATGCTCACTCAGTTGGAGCTTCAAGTCGATGGTAATTTCAATCAGAATCTGAATTCAAAGACTCTTTCAGCTCCCAATCTCAGTGCAATGGATTTTCCTGCTCTTACTTCACCAGATGGACAGACTACTGTGAAATACACTTCAGACAATGTCCAACAAAGTGGCAATCCCTACCGATCGTCTGACAAGGACATGCTCCTTTTCAAGTCTACCTCTTCAGTTCCATCTAGAGGTGATATTGACTTTGCTTCTGCTGTCAGGAAACTGGCTTCCCAGGATTCTGGTATATGGAAGTATGAAAAAAATGGTTCTAGTGATGCTGCTATTGGCTCAAGTCGAAGTTCTAATGTTCTGGCTAGTGCCTACAATGGTGGACAGGGAAGAGCCAATTTTGGTGATAGGTTGCAGAACCGTGGTTCTGCTCGAGCAGCTCCTGTTTGGCTTGAAACTGGTGATGCAGTTGCAAATATGTATTCTGAGATGCGGGAGGAGGCTCGTGATCATGCACGCTTGCGTAATGCATATTTTGAGCAGGCACGGCAAGCATATCTAATAGGAAATAAGGCCCTAGCAAAGGAACTGAGTGTTAAAGGGCAACTGCACAACATGCACATGAAAGCAGCTCATGGAAAGGCTCAAGAATCTATTTATCGCCAGAGGAATCCAGTTGGTGCAGAGATGCAGGGGAATGGAAGAGGACAAGAGAGGATGATAGACCTCCATGGGTTGCATGTAAGTGAAGCCATTCACGTACTAAAACATGAACTGAGCGTGCTAAGGAGCACGGCTAGAGCTGCCGAGCAGCGTTTGCAGGTTTATATATGCGTTGGTACAGGTCACCATACCCGTGGTTCCCGTACTCCTGCAAGACTTCCAGTAGCTGTACAGCGTTATCTACTTGAAGAAGAGGGTCTTGACTACACAGAACCACAGCCGGGCCTACTTCGAGTTGTGATATATTGA 1611 0.4531 MSLIQKGSQTDAKLSSPNKVTTLNPNAAEFIPFSLRSLPSGSTSSVDATRFTTSGALGKAVLDRSESSVSNNSDDEVHKYWRCQLPDDITPDFKVMGEDEPQGLNNLSLAGLSIHDDHDSSREDLSSASFLNSLTKPWDVQIGNTNQHISSGQEGLAYDENSGHGFLNDLLGEQAIVDGVDMNPLEFLASQFPGFASESLAEVYFANGGDLNLTIEMLTQLELQVDGNFNQNLNSKTLSAPNLSAMDFPALTSPDGQTTVKYTSDNVQQSGNPYRSSDKDMLLFKSTSSVPSRGDIDFASAVRKLASQDSGIWKYEKNGSSDAAIGSSRSSNVLASAYNGGQGRANFGDRLQNRGSARAAPVWLETGDAVANMYSEMREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPVGAEMQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPVAVQRYLLEEEGLDYTEPQPGLLRVVIY 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3397 536 SMART SMR_2 451 536 IPR002625 -
Sto9g3397 536 SMART DUF1771_2 373 438 IPR013899 -
Sto9g3397 536 MobiDBLite consensus disorder prediction 1 21 - -
Sto9g3397 536 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 122 - -
Sto9g3397 536 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 120 536 - -
Sto9g3397 536 ProSiteProfiles CUE domain profile. 180 223 IPR003892 GO:0043130
Sto9g3397 536 Pfam Domain of unknown function (DUF1771) 374 437 IPR013899 -
Sto9g3397 536 Gene3D - 421 535 IPR036063 -
Sto9g3397 536 ProSiteProfiles Smr domain profile. 454 536 IPR002625 -
Sto9g3397 536 SUPERFAMILY SMR domain-like 452 534 IPR036063 -
Sto9g3397 536 CDD CUE_CID7_like 183 224 IPR041806 -
Sto9g3397 536 Coils Coil 465 485 - -
Sto9g3397 536 Pfam Smr domain 454 522 IPR002625 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3397 Sto-Chr9 33665540 33668576 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3397 - - gmx:100796128 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3397 9 33665540 33668576 Sto9g3397 9 33665540 33668576 ECH