Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3372 ATGGCTTCGGTGCACGCATTTCTCTCGCACACCCAAACTTCTCTGCCTTTGCGTCTTCCAACTCCACTGTCCACGGAAATCTCACCTCCTCCACTTCTACTTTCATTCACACCATTATCATCAACAAGAAACTACACAAGGTGTGGGGCCATTGCAGACGTCAAGGCTACACCTTCGCTTGATGGCAAAGATGGAGAAGATCACAAGGTTCTTCTAGGACCTTCCACTGAGGAGGAGCAGAGAGGTGAGAAGGTCGTGGCGGACTATGATTGGACGGAAGAATGGTACCCCTTGTACCTGACGCAGAATGTGCCCCACGATGCACCTTTGGGTCTCAAGGTGTTTGACAAGCAGCTCGTGTTGTTTAGGGACGGAAATGGCCAGCTTCAGTGTTACCAAGATCGCTGCCCTCACAGGTTAGCAAAACTATCTGAAGGTCAAATAATTGATGGAAGGCTTGAGTGCCTATACCATGGATGGCAATTTGAAGGGCAGGGCAAATGTGTGAGGATACCTCAGCTTCCAGCTGATGCCAAAATCCCTCGATCCGCTTGTGTTAAGACATACGAGGTGAGGGATTCTCAAGGAGTTGTGTGGGTATGGATGTCTCAAAACACACCTCCAAACACGAACAAGCTTCCTTGGTTTGAGAACTTCGCAAGGCCAGGGTTTCAAGACGTTTCAACGATTCACGAACTCCCTTATGATCACTCCATTCTTCTTGAAAACCTGATGGATCCTGCTCATATCCCAATCTCACACGACAGAACAGATTGGTCCGCTAGAAGAGAAGACGCTCAACCTCTAAACTTTGAGGTGACAGAACGCACAGACAGAGGATTTGCAGGGTGGTGGTGGGGCAGAGAGAAAGACGGGTCTAACTCTAAGCCTAACTTCCTAAGGTTTGAAGCCCCTTGCGTTCTTCAAAACAACCGGGAAATCGTGGACAAGAATGGCGAGAAGCACTACTTCACGGGACTCTTCCTCTGTAGGCCAACAGGACAAGGGAAGTCGATGTTGATAGTGAGATTTGGAGGGACAAAAACATCCCCACTGGCAAAACTGTTCCCGAAATGGTACCTCCATCAGAATGCAAGCAAGGTATTTGAGCAAGACATGGGGTTCTTATCATCCCAGAATGAAACATTAATGAAAGAGAAGGTTCCCACAAAGGAATTATACCTTAACTTAAAATCGTCAGACACGTGGGTTGCTGAATACAGAAAGTGGATGGACAAAGTGGGGCATGGGATGCCCTATCATTTTGGGCATAGTACTATTTCTTTGCCCAAAGAGCCTGCGGTTGTAGAATATGCACCTGCAGGGCTCATTGCTGCATTTTCAGCTTCTTCGCCAACTAAAGGAGGAATTGGGACCTTGCACGCACCAAATTTGGCCAATAGGTATTTTAGGCATGTGATACATTGCAAAGGGTGTAGAAGCGTTGTGAAAGCTTTTGAAGCTTGGAAGAATGGTCTTTCGGCTATGGCTATTGCATTGGCTGCATTGGCGATTATGGTATCTGGAAGGCAATGGAAGGTCCTTCTCCTGGTATCTGCATCCATGTGTTCAGCTGGAGTTTACGTTTGCTCAACCGCCATTGCAATGAATACAACAAACTTTATTAGGACACACAGGAGATTTTGA 1647 0.4712 MASVHAFLSHTQTSLPLRLPTPLSTEISPPPLLLSFTPLSSTRNYTRCGAIADVKATPSLDGKDGEDHKVLLGPSTEEEQRGEKVVADYDWTEEWYPLYLTQNVPHDAPLGLKVFDKQLVLFRDGNGQLQCYQDRCPHRLAKLSEGQIIDGRLECLYHGWQFEGQGKCVRIPQLPADAKIPRSACVKTYEVRDSQGVVWVWMSQNTPPNTNKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWSARREDAQPLNFEVTERTDRGFAGWWWGREKDGSNSKPNFLRFEAPCVLQNNREIVDKNGEKHYFTGLFLCRPTGQGKSMLIVRFGGTKTSPLAKLFPKWYLHQNASKVFEQDMGFLSSQNETLMKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKEPAVVEYAPAGLIAAFSASSPTKGGIGTLHAPNLANRYFRHVIHCKGCRSVVKAFEAWKNGLSAMAIALAALAIMVSGRQWKVLLLVSASMCSAGVYVCSTAIAMNTTNFIRTHRRF 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3372 548 Gene3D - 222 416 - -
Sto9g3372 548 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 58 548 - -
Sto9g3372 548 Pfam Pheophorbide a oxygenase 302 387 IPR013626 GO:0010277
Sto9g3372 548 Pfam Rieske [2Fe-2S] domain 94 176 IPR017941 GO:0051537
Sto9g3372 548 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 58 548 - -
Sto9g3372 548 SUPERFAMILY Bet v1-like 195 417 - -
Sto9g3372 548 SUPERFAMILY ISP domain 88 209 IPR036922 GO:0051537
Sto9g3372 548 Gene3D - 90 219 IPR036922 GO:0051537
Sto9g3372 548 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 95 200 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3372 Sto-Chr9 33511679 33513505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3372 - - gmx:100808233 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3372 9 33511679 33513505 Sto9g3372 9 33511679 33513505 ECH