Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3326 TTGGAATCGGATAGAAGTCTTGGGAATTTGGATGCAAAACAAGAGAACTCACAAAGGGCTGGAGAGGAAGCAACGGTGTCTCTGCAAATGGGTACACTTCTCAAGTGCTACAGACCCTTCTTCTCAGTGTTTCCCTTCCCGCCACGAATGATTCAACTCAGAAGCAACCCAAGTGCCCACGCCGCCATCTTCAGGAGGAAGAAACTGCCTTCGCTTACCCATTGTTTTAGTGTCAGTTCTTTGCGGTCATCCCATCCGTCGGTTGCTGAGCCGAGCTTCGACAAGTCCGACTGTGAGAGCATCAAAAGCCCATCGCCGGAGCTGTGGCTGTATAATACGATGACTAGAAGGAAGGAGGTATTCAAACCCAAAGTGGAAGGCAAAGTTGGAATGTATGTCTGTGGAGTTACTGCATATGATCTTAGCCATATTGGACATGCTCGTGTCTATGTCAATTTTGACGTTCTTTACAGATATCTTAAGCATTTGGAATTTGAAGTCTGTTATGTTCGCAATTTTACTGACGTGGATGACAAGATAATTGCTAGAGCAAACGAATTAGGAGTGGATCCAATCAGTTTGAGTCATCGTTATTGTGACGAGTTCAGTCAGGATATGGTATCTCTTAATTGTCTACCTCCTTCTGTGGAACCACGAGTCTCAGAGCACATACCCCAAATCATTGACTTGATTGAGCAGATTATTAATAATGGGTACGCCTATATTGTTGATGGAGATGTATACTTTAATGTGGAAAAATTTCCAGAATATGGTCAATTATCTAAACGAGATCTAGAAGATAATCGAGCTGGTGAGAGGGTTGCCATTGATTCAAGGAAGAAAAATCCCGCTGATTTTGCTCTTTGGAAGTCTGCAAAGCAGGGAGAGCCATCTTGGGAGAGTCCCTGGGGTCCTGGAAGACCGGGGTGGCATATTGAATGCAGTGCTATGAGTGCAGCTTATCTCAGTTACTCTTTTGACATTCATGGTGGAGGGATTGACCTTATATTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCGTGTAAGAAAAGTAATATTAGTCTCTGGATACACAACGGCTTTGTCACTGTTAACTCAGAGAAGATGTCCAAGTCTCTGGGAAACTTTTTCACAATACGGCAGGTTGTAGACCTATACCATCCTATGGCTTTGAGATATTTTTTGATCGGAGCCCATTATCGATCTCCAATTAACTACTCACATATACAGCTTGAAAGTGCTTCAGATCGTGTTTTCTACATATATGAGACTCTACATGAATGTGAAAGCATTCTGTACCAACATGATCTAACAAATATGAAGGATTCCGTTCCACCTGATACTTTGGATATCATTAATAAGTTTCATGACGTTTTTGTGGCCTCAATGTCTGATGATCTTCACACCCCGGTTGTATTGGCTGCACTTTCTGACCCTTTAAAAGTAATAAACGATCTACTACATACTCGCAAGGGGAGGAAACAAAATTTGCGAATTGAGTCACTTTCTGCTATTGAGAAGAGTATCAGGAACGTTCTGACTATTTTAGGACTTATGCCTTCAAGTTATTCTGAGGTGTTGCAGCAGCTTAGGGAAAAAGCTTTAAAGCGTGCAAAGTTGACAGAAGATGATGTCTTTCAGAAAATTAAAGAACGTGGTGATGCCAGAATAAATAAGGAGTACGAAAAATCAGATGCAATTAGGAATGATCTGGCTGCTTTAGGTATTGCTCTTATGGACAGCCCGAATGGTACAACGTGGAGGCCCTCCATTCCTCTTTCACTTCAAGAACAGCAGATTGATGCACCTTGA 1821 0.4217 LESDRSLGNLDAKQENSQRAGEEATVSLQMGTLLKCYRPFFSVFPFPPRMIQLRSNPSAHAAIFRRKKLPSLTHCFSVSSLRSSHPSVAEPSFDKSDCESIKSPSPELWLYNTMTRRKEVFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVNFDVLYRYLKHLEFEVCYVRNFTDVDDKIIARANELGVDPISLSHRYCDEFSQDMVSLNCLPPSVEPRVSEHIPQIIDLIEQIINNGYAYIVDGDVYFNVEKFPEYGQLSKRDLEDNRAGERVAIDSRKKNPADFALWKSAKQGEPSWESPWGPGRPGWHIECSAMSAAYLSYSFDIHGGGIDLIFPHHENEIAQSCAACKKSNISLWIHNGFVTVNSEKMSKSLGNFFTIRQVVDLYHPMALRYFLIGAHYRSPINYSHIQLESASDRVFYIYETLHECESILYQHDLTNMKDSVPPDTLDIINKFHDVFVASMSDDLHTPVVLAALSDPLKVINDLLHTRKGRKQNLRIESLSAIEKSIRNVLTILGLMPSSYSEVLQQLREKALKRAKLTEDDVFQKIKERGDARINKEYEKSDAIRNDLAALGIALMDSPNGTTWRPSIPLSLQEQQIDAP 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3326 606 TIGRFAM cysS: cysteine--tRNA ligase 108 591 IPR015803 GO:0004817|GO:0005524|GO:0006423
Sto9g3326 606 PRINTS Cysteinyl-tRNA synthetase signature 167 176 IPR024909 -
Sto9g3326 606 PRINTS Cysteinyl-tRNA synthetase signature 296 314 IPR024909 -
Sto9g3326 606 PRINTS Cysteinyl-tRNA synthetase signature 131 142 IPR024909 -
Sto9g3326 606 PRINTS Cysteinyl-tRNA synthetase signature 327 348 IPR024909 -
Sto9g3326 606 Gene3D HUPs 90 410 IPR014729 -
Sto9g3326 606 Hamap Cysteine--tRNA ligase [cysS]. 108 593 IPR015803 GO:0004817|GO:0005524|GO:0006423
Sto9g3326 606 MobiDBLite consensus disorder prediction 1 23 - -
Sto9g3326 606 Gene3D - 411 592 - -
Sto9g3326 606 Pfam tRNA synthetases class I (C) catalytic domain 121 417 IPR032678 -
Sto9g3326 606 CDD CysRS_core 109 410 IPR032678 -
Sto9g3326 606 PANTHER CYSTEINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 107 602 - -
Sto9g3326 606 SMART dalr_2_4 461 530 IPR015273 GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423
Sto9g3326 606 PANTHER CYSTEINYL-TRNA SYNTHETASE 107 602 IPR024909 -
Sto9g3326 606 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 446 591 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Sto9g3326 606 SUPERFAMILY Nucleotidylyl transferase 107 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3326 Sto-Chr9 33212777 33216878 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3326 K01883 - gmx:100786700 892.493