Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3323 ATGGGCTTCCTCACTGGCATGGCCATTGGGATAACCCTTGGCATCGCTTTAATCTTCGCTTTTGCTCGTTTCCAAATTACCCGTTCCAACCATCGTTCCCATCTGGCCAAAACAGTCGCAGCTTTTGCCAGGATGACTATGGAAGATTCCAGAAGAATTCTTCCCCCTAAACAGAAATTAACTTGGCTCAATACCCACCTCGACAAGATTTGGCCATATGTTAATCAGGCAGCATCAGAGTTGATAAAAAGAATTGTGGAACCCACTCTTGACCAATATACACCCACCATGTTATCTTCAATCACCTTCAATAAGTTGACTCTTGGTACTGTGGCTCCTCAATTTACAGGAATTTCTATAGTTGAAGCTGAAAGTGGGGCTGATGGAGTGACAATGGAGTTAGAGATTCAATGGGATGGTAATCCCAAGATCGTATTAGATATTAAAACTCTAGTTGGTGTTGTAAAAAATATTCGATTCACAGGAGTTTTCAGGTTGATCTTCAAACCACTAGTGAATGAGTTCCCTTCCTTTGGGGCTATTTCTTATTCCTTGATAGAGCATAAACATCTGGACTTTACTCTCAAGGTTGTTGGTGGTGATATTTCAACTGTCCCAGGAATTTCTGATGCTATAGAGGAAACAATTCGAGATGCTATTGAGGGTTCTATAACTTGGCCCGTTCGCAAAATCATACCAATTATAGCAGGGGATTACAGCAACCTGGAGTTGAAATCTGTAGGAACACTTGAAGTGAAACTAGTGGAGGCAAAGAACTTGGCAAACAAAGACCTGATAGGCAAATCCGATCCTTGTGCTGTTCTATTTGTTCGTCCTCTTCGCAACGCAATTCAAACCAGCAAAACAATCAACAATGAGTTGGATCCAGTATGGAATGAGAACTTTGAGTTCAGCGTAGAAGATGCATCTACCCAACACTTGACTGTAAGAGTGTTTGATGATGAAGGCATTCAGGCTAAACAGCTTATTGGATGTGCCCAAGTTCCTCTAAAGGATCTTCAACCTGGTAAAGTCAAGGATGTGTGGTTGAAATTGGTTAAGGATTTGGAGGTCCAGAAAGATACAAAATACAGGGGCGAGGTACACTTGGAGCTCTTGTACTGCCCTTACGGTGTGGAGAGCATTTTTACAAACCTGTATAGTCTTAATTACGGATTAACCATATTGGAGAAGGCTCTTAAGGATGAAATAATGGGTGGTGATGTAAACAGATCCAAGAAAAAATATGTGATAGTGAGAGGGGTACTGTCTGTGACTGTGATATCGGCACAAGACCTTCCACCTACGGATATATCGGGCAAGTCTAATCCTTATGTGGTCCTAATCTTGAAAAAAGCCGACCAAAAACTCAAGACCAGGGTTGCGAATCCAAGTCTAAACCCAGTTTGGAATCAAACGTTTGACTTTGTTGTGGAGGATGGCTTGCACGAAATGTTACTTGTTGAAGTTTGGGATCATGATCTTGTTGGGAAGGACAAGATAGGAAGAGTGACGATGACACTCACAAGGGTCATCCTAGAAGGAGAAGTTGAGGAGAGTTATCCGCTGGATGGAGCCAAATCTGGAAAACTTCATCTGCATCTTCGCTGGGTTCCACAGCATAAGTATCGAGATCCTTAA 1641 0.4223 MGFLTGMAIGITLGIALIFAFARFQITRSNHRSHLAKTVAAFARMTMEDSRRILPPKQKLTWLNTHLDKIWPYVNQAASELIKRIVEPTLDQYTPTMLSSITFNKLTLGTVAPQFTGISIVEAESGADGVTMELEIQWDGNPKIVLDIKTLVGVVKNIRFTGVFRLIFKPLVNEFPSFGAISYSLIEHKHLDFTLKVVGGDISTVPGISDAIEETIRDAIEGSITWPVRKIIPIIAGDYSNLELKSVGTLEVKLVEAKNLANKDLIGKSDPCAVLFVRPLRNAIQTSKTINNELDPVWNENFEFSVEDASTQHLTVRVFDDEGIQAKQLIGCAQVPLKDLQPGKVKDVWLKLVKDLEVQKDTKYRGEVHLELLYCPYGVESIFTNLYSLNYGLTILEKALKDEIMGGDVNRSKKKYVIVRGVLSVTVISAQDLPPTDISGKSNPYVVLILKKADQKLKTRVANPSLNPVWNQTFDFVVEDGLHEMLLVEVWDHDLVGKDKIGRVTMTLTRVILEGEVEESYPLDGAKSGKLHLHLRWVPQHKYRDP 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3323 546 SMART C2_3c 249 349 IPR000008 -
Sto9g3323 546 SMART C2_3c 422 520 IPR000008 -
Sto9g3323 546 CDD C2 250 352 - -
Sto9g3323 546 Pfam C2 domain 421 523 IPR000008 -
Sto9g3323 546 Pfam C2 domain 248 352 IPR000008 -
Sto9g3323 546 ProSiteProfiles C2 domain profile. 401 521 IPR000008 -
Sto9g3323 546 PANTHER SYNAPTOTAGMIN-4 1 545 - -
Sto9g3323 546 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 56 235 IPR031468 GO:0008289
Sto9g3323 546 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 247 377 IPR035892 -
Sto9g3323 546 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 545 IPR045050 GO:0008289
Sto9g3323 546 Gene3D C2 domain 240 376 IPR035892 -
Sto9g3323 546 Gene3D C2 domain 404 540 IPR035892 -
Sto9g3323 546 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 415 540 IPR035892 -
Sto9g3323 546 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 60 234 IPR039010 -
Sto9g3323 546 PRINTS C2 domain signature 438 450 IPR000008 -
Sto9g3323 546 PRINTS C2 domain signature 464 477 IPR000008 -
Sto9g3323 546 PRINTS C2 domain signature 486 494 IPR000008 -
Sto9g3323 546 CDD C2 423 523 - -
Sto9g3323 546 ProSiteProfiles C2 domain profile. 229 350 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3323 Sto-Chr9 33192298 33195096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3323 250 537 Lipid Metabolism Gene Families AT1G51570 23.125 3.47e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3323 - - gmx:100787972 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3323 9 33192298 33195096 Sto9g3323 9 33192298 33195096 ECH