Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3311 ATGGCACCGAGCACGATCCGGAAGGCGATTGGGGCGGTCAAGGATCAGACGAGTATAGGGATAGCGAAGGTTGCGAGCAATTTGGCACCGGAGCTCGAGGTGGCCATCGTCAAAGCCACAAGTCACGACGATGATCCGGCCAACGAAAAATACGTACGCGAGATCTTGAGCTTGATGTCTTTTTCTCGTGGCTATGTTCATGCTAGCGTTTCCACGGTGTCCAAACGTTTGAGTAAGACGCGGGACTGGATTGTGGCTCTCAAGGCACTGATACTTGTGCACAGATTGATGAATGAGGGTCCCCCCTTGTTTCAAGAGGAGATCTTGTATGCCACGAGGAAGGGAACCAGACTTCTCAACATGTCCGATTTCAGGGATGAGGCTCACTCTAGCTCCTGGGATCATTCGGCTTTCGTCAGAACCTATGCTATGTATCTGGATCAACGGCTCGAGCTGATGCTGTTTGACAGAAAAGGTGGGAGTGctgctggtggtggCGTGGACGATAGATTTGGGGGAAGAGATAATTTTAGGTCGCCGCCACCAAGGCCATATGAAATTGAGTATGGAGATTTTAGGGGGGAAAGTGGGTATGGAAATGGGATGCGACGGACAAGATCTTTTGGGGATATGAGCGAAACGATGGGCCGCGATGGTAGGGAGGAGAAAAGGGTTGTGACTGTGACCCCCTTGAGAGATATGAAGCCCGAGAGGCTTTTTGGCAAGATGGCTCATCTGCAGAGGCTGTTAGATCGATTCTTGGCTTGTAGGCCTACGGGATTGGCAAAGAATAGTAGAATGGTTTTGATCGCATTATATCCTGTTGTTAGGGAGAGCTTTCAGTTGTATGCTGATATCTGTGAGGTTTTGGCTGTTTTACTTGACAAATTCTTTGACATGGAATACCCGGATTGTGTTAAGGCGTTTGATGCTTATGCCAGTGCAGCTAAGCAGATTGATGAGCTTGTTGCCTTCTACAATTGGTGCAAGGATACTGGTGTGGCAAGATCATCAGAATACCCAGAAGTCCAGAGGATTACTAGTAAGTTACTGGAGACACTTGAGGAGTTTGTGAGGGATAGGGCAAAGAGACCAAAAAGTCCAGAAAGGAAGGAGGAACCTCAGCCTGTGGCTAAAGAGGAAGAGCCAGTACcagatatgaatgaaataaaggCTTTGCCTCCACCTGAGAATTACACCCCACCTCCTCCACCTGAGCCAGAGCCAGAGCCTAAGCCACAGCAACAAGTTACGGAGGACTTGGTGAATTTAAGAGATGATGCAGTCACTGCAGATGATCAAGGCAATAGGTTTGCTCTGGCACTCTTTGCTGGTGCACCAGCTAATAATGCAAATGGATCATGGGAAGCATTCCCATCAAATGGACAGCCACAAGTGACTTCTGCTTGGCAAACCCCGGCTGCAGAACCTGGGAAGGCTGATTGGGAATTGGCATTGGTAGAGACTGCTAGCAATTTATCAAATCAAAAGGCAGCTTTAGGTGGTGGACTTGATCCACTGTTGTTGAATGGCATGTACGATCAAGGAATGGTTAGACAGCATACTAGCACTGCACAACTGACTGGAGGGAGTGCAAGCAGTGTGGCATTGCCAGGACCAGGAAAGACCACAACCCCGGTTTTAGCTCTCCCTGCTCCAGATGGATCTGTGCAGCCAGTTAATCAGGATCCTTTTGCTGCATCATTAACCATTCCACCCCCGTCATATGTGCAAATGGCAGATATGGAGAAGAAGCAGCATTTGCTTGTACAGGAGCAGCATGTGTGGCAGCAATATGCGAGGGATGGAATGCAAGGTCAAACTAGCTTGGCCAAACTCAACGGAAATGGATATTATGCTGGGGGTCCGACTCCTATGCCAACAATGCCTTATGGAATGCCTCCGGTCAATGGAATGGGAGCTCCAACCGGGTATTACTATACACATTACTGA 1953 0.4798 MAPSTIRKAIGAVKDQTSIGIAKVASNLAPELEVAIVKATSHDDDPANEKYVREILSLMSFSRGYVHASVSTVSKRLSKTRDWIVALKALILVHRLMNEGPPLFQEEILYATRKGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKGGSAAGGGVDDRFGGRDNFRSPPPRPYEIEYGDFRGESGYGNGMRRTRSFGDMSETMGRDGREEKRVVTVTPLRDMKPERLFGKMAHLQRLLDRFLACRPTGLAKNSRMVLIALYPVVRESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEPQPVAKEEEPVPDMNEIKALPPPENYTPPPPPEPEPEPKPQQQVTEDLVNLRDDAVTADDQGNRFALALFAGAPANNANGSWEAFPSNGQPQVTSAWQTPAAEPGKADWELALVETASNLSNQKAALGGGLDPLLLNGMYDQGMVRQHTSTAQLTGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLTIPPPSYVQMADMEKKQHLLVQEQHVWQQYARDGMQGQTSLAKLNGNGYYAGGPTPMPTMPYGMPPVNGMGAPTGYYYTHY 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3311 650 SUPERFAMILY GAT-like domain 230 360 - -
Sto9g3311 650 SMART enth_2 30 160 IPR013809 -
Sto9g3311 650 MobiDBLite consensus disorder prediction 359 418 - -
Sto9g3311 650 PANTHER - 5 624 - -
Sto9g3311 650 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Sto9g3311 650 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 624 IPR045192 GO:0048268|GO:0072583
Sto9g3311 650 MobiDBLite consensus disorder prediction 395 412 - -
Sto9g3311 650 MobiDBLite consensus disorder prediction 359 387 - -
Sto9g3311 650 Gene3D ANTH domain 223 371 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Sto9g3311 650 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Sto9g3311 650 CDD ANTH_N_AP180_plant 32 152 - -
Sto9g3311 650 Gene3D - 2 156 IPR008942 -
Sto9g3311 650 Pfam ANTH domain 204 360 IPR011417 GO:0005543
Sto9g3311 650 Pfam ANTH domain 31 152 IPR011417 GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3311 Sto-Chr9 33128550 33130532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3311 - - adu:107463239 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3311 9 33128550 33130532 Sto9g3311 9 33128550 33130532 ECH