Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3304 ATGGAGCTGAAAGGAACTGGAAAAGAAACTATAGTTACCCAAGTTAGTATCGGTGGCTTTGACAGTCAGGTCAAAGCAAAGGATCTTCTGGGATACTTGGAGGACAAAATTGGACTTGTAGACAGGTGTCGTTTGAAAACTTCTTGGACCCCTCCTGAATCATATCCAGATTTCAAAATCACTAATACAGTAGAAATTGACAAAACGGATGACTATAAGAAGGTTGAGCCTCATGCTTTTGTCCATTTTGCATCACCCAAATCTGCTACTGAGGTCCTCAATGCTGCAGGCCGCTCTGATCTACTCTGGAAGAATTGGAATTTAAAGGTTAGCTTGGGACCTGAAAATCCATACTTCTTGAATCAAAGGAGGAGAACTACAACTCCTTTTAAGCTATCTGATGTACTTGTTGAAATTGGGACTTTGGTTAACCCAGAGAACTTTTTGGTTGCTTGGAGAGGACCTAAAAAAGGGGTCAACTTTCTGGTAGATCCATTTGATGCCATGTGCAAAATTTGTTTTGACAACGATGTTGTTTTCTCTTTTAAAGGTACAAGTAAAAAGGCAGTGATAAAGTGCGATTTTCAAGTGGGTTTCTTGGTTAGAGACATAAATGACATCAGGAGATACAATGATACATCATCTCTAGTTATTCTATTGCAGCTTGCTTCATCACCTTGGGTTTGGTATAGAACTGCCGATGATGACATTGCTGAACCAGTTCCACTTGATTTGCTGGATGATGATGATCCATGGATTAGAACTACTGATTTTACACCTAGTGGGGCCATTGGCCGTTGCAACTTCTATCGAATTTGTATCCCACCTCGGCATGGTGGAAAATTGAAGATTGCCATGGAGTATCTGAAAAGCCAAAGAGTGAAGGAGATTTCCCTCAACCGTCCTGTTAGGATAATGAATGAACCTTCTTATGGGATGCCCATGTCAGATCCTTTCTTCTGCATTCATTTCCAGGAAGGCATCACGTTTGacattattttcttaatcaatgcAATCATACACAAAGGCATACTCAATCAACACAGGTTGTCAGATAGCTTTTTTGGGTTGCTAAGAAATCAAACTAAGGAGGTCAATGTGGCTGCACTGAAGCACTTGTGTTCTTACAAGCGTCCAGTGTTTGATGCTGCCAAGAGGCTAAAAACCATCCAAGAATGGTTGCTGAGAAATCCAAAGCTTTACCAGAGCTCTAAACAGTTAGATGATATAGTTGAGGTTCGAAGACTGGTTATCACTCCAACTAAAGCCTATTGTCTGCCACCAGAAGTTGAAATGTCCAATAGGGTTCTTCGGAAATTCAAAGAAGTTGCAGATCGCTTCTTGAGAGTCACATTTATGGATGAAGGTATGCAGACAATCAATGCAAATGCTCTTAACTATTATTTTGCTCCAATACTGAAGGAAATCACGCAGACTTCCTATTCACagaagacaaatatatatagaagggTGAAGATTATCTTAGAAGAGGGGTTCTACTTATGTGGtcgaaaatattcatttttggccTTCTCATCCAATCAACTGAGAGACCGTTCTGCTTGGTTTTTCGCTGAAGAAAAAAACAGAAGTTGTGATAATATAAGAGATTGGATGGGGAGGTTTAGTAATAAGAATGTTGCAAAATGTGCTGCTAGGATGGGTCAGTGCTTCTCATCGACATATGCCGCTGCAGAGGTTGGATTGAATGATGTTAATTCCATACCTGATATTGAGAGGAATAACTATACTTTCTCTGATGGAATTGGTATCATTACTCCTGAACTTGCAAGTGAAGTAGctgaaaaattgaaattagaCGATGTACCTTCTGCTTATCAGATCAGATATGCTGGTTTTAAGGGGGTTGTGGCCTGTTGGCCAGATAAAGGGGATGGCTTTCAACTCTCATTAAGACCTAGTATGAATAAATTTGAATCTACTCACACTACCTTGGAGATTTGTGCTTGGACACGATTTCAGCCTGGTTTCCTCAATAGGCAGATTGTGACATTGCTTTCAGCCTTGCAAGTGTCTGACGAAGTATTTTGGAAAATGCAGGAGGCGATGGTTTCTAAGTTGAATCAAATGCTTGTGGATGCAGATGTGGCGTTTGATGTTCTCACTAGGTCTTGTGCTGAGCACGGGAATGCTGCAGCAATAATGTTAAGTGTTGGTTTCAGTCCCCAATTGGAACCTCATCTTAGAGGCATCTTAACCTCTGTGCGTGCTGCACAGCTTTGGGGCCTCAGAGAAAAAGCTAGGATCTTTGTCTCATCTGGGAGGTGGTTGATGGGCGTCTTAGATGAGTTGGGTGTGCTTGAACAAGGACAATGCTTTGTCCAAGTCTCTACTCCTTCGCTTGAAAATTGTTTCTCAAAGCATGGCTCAAGGTTTAAAGAGACGAAGAACCTGCAAGCAGTTACAGGTTATGTGGTTATAGCTAAAAATCCTTGTCTTCACCCAGGAGATGTAAGAATTTTGGAAGCAGTTGATGCTCCTGAATTGCATCATTTATATGATTGTCTTGTTTTCCCACAAAAGGGTGATAGACCACATACAAATGAAGCTTCTGGAAGTGACCTTGATGGGGACCTTTATTTTGTTACATGGGATGAGAATCTTATTCCACCCAGTAAGAAGAGTTGGATACCTATGGAGTATTCTTCTGAAGAAAGCAGAATTCTGTCCCGTAAAGTCATGCCTCGGGACATAATAGAATTTTTTGTCAGAAATATGGTAAATGAGAACTTGGGGGCAATCTGCAATGCTCATGTGGTGCATGCTGATCTCAGTGACTATGGCGCCCTGGATGAGAAGTGCATAGCCCTGGCTAAGTTAGCAGCTACAGCTGTTGATTTTCCAAAGACTGGAAAGATTGCCACAATGCCCTCTCATCTGAAACCAAAACTGTACCCTGATTTTATGGGGAAAGAGCAGCATCAATCATATAAATCAAAGAAAATCCTGGGTCGGCTTTACCGGAGAATCAAAGATGCTTATGATAAAGATATTGATGATGCTGGTTCGAGCCATGTAATAGGTGATATACCTTATGATACTGATCTTGAGGTTCCAGGATCTGCCGAGTTTATTACCAATGCATGGGAGCAGAAGTGCTCTTATGATGGTCAGTTGAATGGACTGCTAGGTCAATACAAAgtggaaagagaagaagaagttaTAACTGGACAGATCTGGTCCATGCCCAAATACAGCAGCAGGAAGCAAGGAGATCTTAAGGAAAGGCTCAAGCATGCTTACAGTGCCCTGAGGAAAGAGTTCAGGCAAGCTTTCGAGAAACTAAATTCTGATATGGAAGACTtaagtgaagaaaaaaaacactTGATTCATGAACAGAAAGCATCAGCCTGGTATCAGGTCACATATCATCCCGAATGGGTGAAAAGGTCCCTTGACCTACAAGAAAAATCCCTAGAGAATCAAGGGTCCAATGGTCTTGGAAATAAAGTAATGCTGAGCTTTCCTTGGATTGCAGTTGATTACCTGGCTCGCATTAAGGTACGGAATCGAGGATTTGAAAATGTTGATTCGACTAAGCCAGTTGATTTTCTGGCAAAGTACCTATCTGAAAGGCTGTAA 3603 0.4019 MELKGTGKETIVTQVSIGGFDSQVKAKDLLGYLEDKIGLVDRCRLKTSWTPPESYPDFKITNTVEIDKTDDYKKVEPHAFVHFASPKSATEVLNAAGRSDLLWKNWNLKVSLGPENPYFLNQRRRTTTPFKLSDVLVEIGTLVNPENFLVAWRGPKKGVNFLVDPFDAMCKICFDNDVVFSFKGTSKKAVIKCDFQVGFLVRDINDIRRYNDTSSLVILLQLASSPWVWYRTADDDIAEPVPLDLLDDDDPWIRTTDFTPSGAIGRCNFYRICIPPRHGGKLKIAMEYLKSQRVKEISLNRPVRIMNEPSYGMPMSDPFFCIHFQEGITFDIIFLINAIIHKGILNQHRLSDSFFGLLRNQTKEVNVAALKHLCSYKRPVFDAAKRLKTIQEWLLRNPKLYQSSKQLDDIVEVRRLVITPTKAYCLPPEVEMSNRVLRKFKEVADRFLRVTFMDEGMQTINANALNYYFAPILKEITQTSYSQKTNIYRRVKIILEEGFYLCGRKYSFLAFSSNQLRDRSAWFFAEEKNRSCDNIRDWMGRFSNKNVAKCAARMGQCFSSTYAAAEVGLNDVNSIPDIERNNYTFSDGIGIITPELASEVAEKLKLDDVPSAYQIRYAGFKGVVACWPDKGDGFQLSLRPSMNKFESTHTTLEICAWTRFQPGFLNRQIVTLLSALQVSDEVFWKMQEAMVSKLNQMLVDADVAFDVLTRSCAEHGNAAAIMLSVGFSPQLEPHLRGILTSVRAAQLWGLREKARIFVSSGRWLMGVLDELGVLEQGQCFVQVSTPSLENCFSKHGSRFKETKNLQAVTGYVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMEYSSEESRILSRKVMPRDIIEFFVRNMVNENLGAICNAHVVHADLSDYGALDEKCIALAKLAATAVDFPKTGKIATMPSHLKPKLYPDFMGKEQHQSYKSKKILGRLYRRIKDAYDKDIDDAGSSHVIGDIPYDTDLEVPGSAEFITNAWEQKCSYDGQLNGLLGQYKVEREEEVITGQIWSMPKYSSRKQGDLKERLKHAYSALRKEFRQAFEKLNSDMEDLSEEKKHLIHEQKASAWYQVTYHPEWVKRSLDLQEKSLENQGSNGLGNKVMLSFPWIAVDYLARIKVRNRGFENVDSTKPVDFLAKYLSERL 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3304 1200 PANTHER RNA-DEPENDENT RNA POLYMERASE 7 1199 IPR007855 GO:0003968
Sto9g3304 1200 Pfam RNA dependent RNA polymerase 418 997 IPR007855 GO:0003968
Sto9g3304 1200 Coils Coil 1081 1119 - -
Sto9g3304 1200 PANTHER RNA-DEPENDENT RNA POLYMERASE 6 7 1199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3304 Sto-Chr9 33077052 33081618 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3304 K11699 - gmx:100807347 1988.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3304 9 33077052 33081618 Sto9g3304 9 33077052 33081618 ECH