Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3298 ATGATTAGGAGAATTTCAGTTTGGTATCGTCTTTCCGAGGGACTCGTCGCAAGAGGGATTTCGAAGTCTAGCGTCAATGTGGTTCGTTCTTATTGTGATGGCACCCAGTCCCATCTTCGCCATCAAAAGATTCCAGGGCCGCTTGTGCAATATAGAAGTCTAGTTGAGCAAGGGAAGCTGCAACATGATCCTTACCAAGAAGAAGTTGCTTCAGAGCTGGAGAATTTGCTTGCAAGGTTGGAGCAGTATGAGAAAGAAATGGAGGAATATCATGTAAACCTATCCACATGGGAGAAGAATCGGGAGAAAGAGCGACGTAGACTTATGATGGAGGAAGTTGAGATCAAGCAGCAAGAGGAGGGCTGGTGGATGCAATTAAACAAGAAAGTCGTTGAAAGATGGAATTCTCGGAAAAAACCAGAAAATATGGAGCCAGGAGTAGGAAAATGGGTTTCATATCTTAATCGTGAGAAGAAATTGGATTCAATAGTTGGTCGCCGTCCAACTGCTCCACCAGCCCCCAAAGGACTTTACATATATGGCAATGTTGGCAGTGGGAAGACAATGCTGATGGATATGTTTTATAGTGCCACTGAACAAATTGTTAAACATCGAAGAAGGTACCACTTCCATGAGGCCATGCTAagaataaatgaacaaatgcaCAAGATATGGAAGAATCAAAAGGAGGAGAAGTCTTTGCAATCAAGCATTTCTGATTGGATTATAAATCTTCCCTTTGACACAAAAGCTAAGGAGTGGCTGGCTGCGGAAGAAAGATACAAGCAAGAAGTACAGATGAAAAACATTCTCCTTTCTGTAGCAGATAAGTTTTTTCTGGATCGAGAAGAGGATGAAAGAGGAGCTAGCATTCTGTGCTTCGACGAGATACAGACTGTTGATGTATTTGCTATTGTGACTTTATCTGGAATTCTAAGCAGATTGCTGAGTACTGGAACTATAATTGTAGCTACCAGTAATCGAGCACCAAAGGATTTAAACGAGGCAGGTATGCAACGAGAACTCTTCCAAAAACTTGTCTCCAAATTGGAACAACATTGCAATAATGTATTAATTGGAAGTGAAATTGATTACCGTCGATTTATAGCACAAAGATCAGTAAACCAGGTACACTATTTTTGGCCTCTAGGAAGGGATGCTGTGAATGAATTTGAGAACATGTGGCAAGATGTAACAGGAAGAATGGAAGGAAGAATAATCTCTAGGACTATCTCAGTGATGTTTGGAAGGACACTTGATGTTCATGAAAGTTGTGATGGAGTTGCACGCTTCACATTTGAGTATCTCTGTGGTCGTCCGTTGGGTGCAGCAGATTATATTGCAGTTGCTGAAAACTATCACACTGTTTTCATATCTGATATTCCAGTAATGAGTATGCGCATTCGTGACAagGCAAGGAGATTCATCACTCTTATTGATGAGTTATACAATCATCATTGCCGCTTGTGTTGTTTGGCAGCTGCTTCAATTGATGACTTGTTTCAAGGAACTGAGGAGGGAACACTTTTTGACTTGGAGAGTTTCCAATTTGAAACAGAGACTGAAGGTGGGAAACTTCGCCGAGATGTTCTAGCAGAAGGCACTGTGGGTTCAGGAGGAGCCCCTTCTGGCATCACATCCATTCTATCAGGTCAAGAAGAGATGTTTGCTTTCCGCCGAGCTGTCTCACGCTTGATTGAAATGCAAACGCCATTATACTTGGATGGAGTCTTGAATTTCCATCCTTACTTCCAGAGGCAACGTCGAGAATCTCTTAAAATTTCTTGCGATAACTTACAATCTGAGTTATCGGTGTGA 1818 0.4147 MIRRISVWYRLSEGLVARGISKSSVNVVRSYCDGTQSHLRHQKIPGPLVQYRSLVEQGKLQHDPYQEEVASELENLLARLEQYEKEMEEYHVNLSTWEKNREKERRRLMMEEVEIKQQEEGWWMQLNKKVVERWNSRKKPENMEPGVGKWVSYLNREKKLDSIVGRRPTAPPAPKGLYIYGNVGSGKTMLMDMFYSATEQIVKHRRRYHFHEAMLRINEQMHKIWKNQKEEKSLQSSISDWIINLPFDTKAKEWLAAEERYKQEVQMKNILLSVADKFFLDREEDERGASILCFDEIQTVDVFAIVTLSGILSRLLSTGTIIVATSNRAPKDLNEAGMQRELFQKLVSKLEQHCNNVLIGSEIDYRRFIAQRSVNQVHYFWPLGRDAVNEFENMWQDVTGRMEGRIISRTISVMFGRTLDVHESCDGVARFTFEYLCGRPLGAADYIAVAENYHTVFISDIPVMSMRIRDKARRFITLIDELYNHHCRLCCLAAASIDDLFQGTEEGTLFDLESFQFETETEGGKLRRDVLAEGTVGSGGAPSGITSILSGQEEMFAFRRAVSRLIEMQTPLYLDGVLNFHPYFQRQRRESLKISCDNLQSELSV 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3298 605 SMART AAA_5 173 351 IPR003593 -
Sto9g3298 605 Gene3D - 164 367 IPR027417 -
Sto9g3298 605 Coils Coil 66 119 - -
Sto9g3298 605 PANTHER ATPASE N2B 39 593 IPR005654 GO:0005524|GO:0016887
Sto9g3298 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 377 IPR027417 -
Sto9g3298 605 Pfam AFG1-like ATPase 160 505 IPR005654 GO:0005524|GO:0016887
Sto9g3298 605 PANTHER AFG1-LIKE ATPASE FAMILY PROTEIN 39 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3298 Sto-Chr9 33044232 33050297 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3298 - - mtr:MTR_1g012370 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3298 9 33044232 33050297 Sto9g3298 9 33044232 33050297 ECH