Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3296 ATGGAAGCAACTGCTGGAATGGTGGCTGGGTCCTATAAAAGGAACGAGCTCGTTCGTATTCGGCACGATTCAGATAGTGGGCCCAAACCACTAAAGAATTTGACTGGCCAAATCTGTCAAATATGTGGTGATACTGTTGGACTAACGGCAACTGGTGATGTCTTTGTGGCTTGCAATGAGTGTGCCTTCCCAGTTTGTCGTCCCTGTTATGAATATGAGCGAAAAGATGGAAACAAGTCTTGCCCTCAGTGCAAGACTAGGTACAAACGCCACAAAGGGAGTCCACGAGTGGagggtgatgatgatgaggatgatgatgatgatgatatagaGAATGAGTTCAATTATGGCCAAGGAAATACCAAGGCTAGGCGGCAGTGGGAAGGAGAAGATGCTgatctctcttcatcttctagACATGATCCTCAACAGCCAATTCGACTTCTCACCAATGGACGGCAGATGTCTGGTGAGATTCCTTGTGCGACACCTGATACCCAATCTGTGCGAACTACATCAGGTCCTTTAGGTCCATCTGAAAAGGTTCACTCCCTTCCCTATATTGATCCAAGGCAACCAGTTCCAGTGAGAATTGTAGACCCTTCAAAGGACTTAAACTCTTATGGTATTTCAAATATTGACTGGAAAGAAAGGGTTGAAGGTTGGAAGCTCAAGCAGGAAAAAAATATGGTGCAAATGACTGGAAGATACACTGAAGGGAAGGGAGACATGGAAGGGACTGGTTCCAATGGAGAAGAACTGCAAATGGTTGATGATGCTCGGCAGCCTTTGAGTCGCGTGGTGCCTATAAGTTCTTCCCAGTTGACCCCTTATCGTGTTGTGATCATCCTCCGTCTTATTATTCTGGGCTTCTTCTTACAATACCGTGCAACTCATCCTGTCAAAGATGCATACCCTCTGTGGTTGACATCAGTTATCTGTGAGATTTGGTTTGCCTTGTCCTGGCTTTTGGATCAGTTTCCAAAATGGTCTCCCATTAATCGGGAGACTTACCTTGACAGGCTTGCTTTAAGatATGACCGTGATGGAGAACCATCACAGTTGGTACCTGTGGATGTTTTTGTTAGTACAGTGGATCCGCTCAAAGAGCCTCCGCTTGTAACTGCAAACACTGTTTTGTCAATACTTTCTGTTGACTACCCTGTGGATAAGGTTTCCTGCTATGTATCAGATGATGGTTCAGCTATGTTGACTTTTGAAGCCCTTTCAGAAACAGCTGAATTTGCAAAGAAGTGGGTACCCTTCTGCAAGAAGCACAATATTGAGCCAAGAGCCCCTGAATTTTATTTTGCCCAGAAGATAGATTACTTGAAGGACAAGATTCAACCTTCTTTTGTGAAGGAGCGCCGAGCTATGAAGAGAGAATACGAAGAATTCAAAGTACGGATCAATGCCCTAGTTGCCAAAGCTCAAAAGATGCCAGAAGAAGGTTGGACAATGCAGGATGGAACTCCATGGCCTGGAAATAATCCTAGGGATCATCCTGGAATGATTCAGGTGTTCTTAGGTCATAGTGGAGGGCTTGATACAGATGGAAATGAGCTACCGAGACTTGTTTATGTTTCTCGTGAGAAGAGACCTGGCTTCCAGCATCACAAGAAAGCCGGAGCTATGAATGCTTTGATTCGAGTTTCAGCTGTGTTGACCAATGGTGCATATCTATTGAACGTCGACTGTGACCACTATTTCAATAATAGCAAAGCTCTTAAAGAAGCCATGTGTTTCATGATGGATCCTGTTCTTGGAAAGAAGACTTGCTATGTACAATTCCCTCAGAGGTTTGACGGCATTGATTTGCACGATCGATATGCCAATCGCAATATTGTGTTCTTTGATATCAACATGAAAGGGTTGGATGGTATCCAGGGCCCAGTCTATGTCGGAACTGGTTGTTGTTTCAATAGACAGGCTCTATATGGTTATGATCCTGTTTTGACGGAGGAAGATTTGGAGCCCAATATTATTGTGAAGAGCTGTTGGGGTTCTAGAAAGAAAGGAAGGGGTGGCAATAAGAAGTACATAGACAAGAAAAGGGCAGTAAAAAGAACTGAATCCACCATTCCCATCTTCAATATGGAAGACATAGAGGAGGGTGTTGAAGgatATGATGATGAGAGGTCACTTCTTATGTCTCAGAAGAGCCTAGAGAAGCGTTTTGGTCAATCACCAGTTTTTATTGCTGCCACCTTCATGGAGTACGGTGGCATTCCTCCCACAACTAACCCTGCAACTCTTTTAAAGGAAGCTATCCATGTTATCAGCTGTGGTTATGAAGACAAGACAGAATGGGGCAAAGAGATTGGATGGATCTACGGTTCTGTCACGGAAGATATCTTGACCGGGTTCAAGATGCATGCTCGTGGTTGGATTTCTGTCTATTGCATGCCACCCCGCCCAGCATTTAAGGGTTCTGCTCCCATCAATCTTTCTGACCGTCTTAATCAGGTGCTTCGGTGGGCCTTGGGATCAATTGAGATTTTTCTTAGCAGGCATTGTCCCCTATGGTATGGCTACAATGGAAGATTGAAGCCCCTACAGAGGCTGGCTTATATTAACACTATTGTCTACCCCCTCACCTCAATCCCACTGATTGCTTACTGTGTGCTTCCTGCATTTTGTCTTCTCACAAACAAATTTATTATTCCAGAGATAAGCAACTTTGCTAGCATGTGGTTCATTCTCCTCTTCGTCTCCATTTTCACTACTTCAATTCTTGAGCTTAGGTGGAGTGGGGTTGGTATAGAAGACTGGTGGAGGAATGAACAGTTCTGGGTTATTGGTGGTACATCGGCACATCTGTTTGCTGTGTTCCAAGGTCTTCTAAAAGTGCTTGCTGGTATTGATACTAATTTCACTGTCACATCAAAGGCATCAGATGAAGATGGGGACTTTGCTGAGCTCTATGTGTTTAAATGGACATCTCTTCTGATCCCTCCTACAACAGTCCTTATCGTGAACTTGGTAGGGATAGTGGCTGGTGTGTCCTATGCCATAAACAGTGGTTACCAATCTTGGGGTCCTCTATTTGGGAAGCTGTTTTTTGCTATATGGGTCATTGCCCATCTATACCCATTCTTGAAGGGTCTGTTGGGAAGGCAAAACCGTACACCAACCATTGTTATTGTTTGGTCTGTACTCCTTGCTTCCATATTCTCCTTGCTGTGGGTGAGGATAGACCCCTTCACCACTGACACTAGCAAAGCTTCCAATGGTCAATGCGGCATCAACTGCTAG 3255 0.4369 MEATAGMVAGSYKRNELVRIRHDSDSGPKPLKNLTGQICQICGDTVGLTATGDVFVACNECAFPVCRPCYEYERKDGNKSCPQCKTRYKRHKGSPRVEGDDDEDDDDDDIENEFNYGQGNTKARRQWEGEDADLSSSSRHDPQQPIRLLTNGRQMSGEIPCATPDTQSVRTTSGPLGPSEKVHSLPYIDPRQPVPVRIVDPSKDLNSYGISNIDWKERVEGWKLKQEKNMVQMTGRYTEGKGDMEGTGSNGEELQMVDDARQPLSRVVPISSSQLTPYRVVIILRLIILGFFLQYRATHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWSPINRETYLDRLALRYDRDGEPSQLVPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPVLGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGRGGNKKYIDKKRAVKRTESTIPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEYGGIPPTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISVYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRLKPLQRLAYINTIVYPLTSIPLIAYCVLPAFCLLTNKFIIPEISNFASMWFILLFVSIFTTSILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRIDPFTTDTSKASNGQCGINC 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3296 1084 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 19 1084 - -
Sto9g3296 1084 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Sto9g3296 1084 Pfam Cellulose synthase 358 1075 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sto9g3296 1084 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Sto9g3296 1084 SUPERFAMILY Nucleotide-diphospho-sugar transferases 376 658 IPR029044 -
Sto9g3296 1084 MobiDBLite consensus disorder prediction 74 188 - -
Sto9g3296 1084 MobiDBLite consensus disorder prediction 138 178 - -
Sto9g3296 1084 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Sto9g3296 1084 MobiDBLite consensus disorder prediction 99 113 - -
Sto9g3296 1084 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 516 658 IPR029044 -
Sto9g3296 1084 Pfam Zinc-binding RING-finger 29 105 IPR027934 -
Sto9g3296 1084 Coils Coil 456 476 - -
Sto9g3296 1084 SUPERFAMILY RING/U-box 22 111 - -
Sto9g3296 1084 PANTHER CELLULOSE SYNTHASE 19 1084 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3296 Sto-Chr9 33030055 33035758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3296 1 1082 Glycosyltransferase AT4G32410 86.556 0.0 1915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3296 K10999 - gmx:100810567 2102.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3296 9 33030055 33035758 Sto9g3296 9 33030055 33035758 ECH