Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3289 ATGAAATTCAAAAAGGGAAGTAAAGTTGAGGTCCTTAGCTATGGCGAGGCGCCTTATGTGGAATGGCGCTGTGCCGAGATTATTTCCAGTAATGAGCACACTTTCAGAGTCCAGTACGACTGTTGTAGCATGACTAGTGAGGCTATAGTGGAGAGAGTTTCAAAGAAGGTCATCAGGCCTTGTCCCCCTATTGTAAACTGCGTTGATAGTTGGTCGGCTGATGATGTTGTGGAGGTTAATCATGCTGGTTGTTGGAAAGGGGCTATTGTTTCAAAGTTTCTAGGTGGAGACGTTTATTTGGTGAGGCTGCTGGGATCATGCAAGAGGTTAAGAATTCACAAATTTAACATAAGGGCACGCCAATGTTGGCAGGATGACCAATGGGTTACAATGCAGAAGGGCGATTCTGGACTTGGGAATTGTGGGAGGAATGTGAGCTTAAACACTCATAAGATGAAACCTGAAGTTCAGCAggcgaaaaattattattttccagGACCGGATGGAAGCGATCTGCAGGAGTCTCGTCTAGTCTCATCTACAACATTGAAGAGAGTGTCCCCGTATTGCTCCTCCCCCTTTGAGGCATACCCAAGAAAAATGAGAGCCATTATGAATAATGAAGTGCTGGAAAAGGTAGATGCTGTTGCTTACCCAAGTGAAAATATGGGTGAAAAATGCATGCATACTTCCTTTAATAATGGAACAAATCAATATTATGAAATGGGGATGGTGAACCCTAAAAATGTCACCACACATTTTCTTGAAAGAATAGACGAACCTAATGATTCTTGTAGTGATTTCTGTTCAGTTGGCAGTTGTAGTGTGACAAGTAATGACTCAAATAAATTCTCTAGTGATATGTTAGCAGGTCCCTGCCAAGATGCAGATAGTTTTTGTAGCGATGCAGAGTCTTTAGATGTTGGAGATGAGGAAGAAAGATGTTCCCTTAATCCGAAAGAATTCAGAATACATAGGTTAGAGTTGCATGCTTATCGCAGTACTCTAGAGGCAATGTATGCTTCTGGTCCCCTAACATGGGAACAAGAAGAACTATTGACTAATCTTCGTATTTCACTCCATGTTTCAAATGATGAGCACTTGTTGGAGATAAAGAACTTAATTTCTTCTGGTAGGCGTTTTTAA 1146 0.4084 MKFKKGSKVEVLSYGEAPYVEWRCAEIISSNEHTFRVQYDCCSMTSEAIVERVSKKVIRPCPPIVNCVDSWSADDVVEVNHAGCWKGAIVSKFLGGDVYLVRLLGSCKRLRIHKFNIRARQCWQDDQWVTMQKGDSGLGNCGRNVSLNTHKMKPEVQQAKNYYFPGPDGSDLQESRLVSSTTLKRVSPYCSSPFEAYPRKMRAIMNNEVLEKVDAVAYPSENMGEKCMHTSFNNGTNQYYEMGMVNPKNVTTHFLERIDEPNDSCSDFCSVGSCSVTSNDSNKFSSDMLAGPCQDADSFCSDAESLDVGDEEERCSLNPKEFRIHRLELHAYRSTLEAMYASGPLTWEQEELLTNLRISLHVSNDEHLLEIKNLISSGRRF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3289 381 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 320 381 IPR005491 -
Sto9g3289 381 Pfam Agenet domain 6 63 IPR008395 -
Sto9g3289 381 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 250 - -
Sto9g3289 381 SMART agenet_At_2 69 125 IPR014002 -
Sto9g3289 381 SMART agenet_At_2 1 66 IPR014002 -
Sto9g3289 381 SMART ENT_2 320 379 IPR005491 -
Sto9g3289 381 Gene3D ENT domain 310 379 IPR036142 -
Sto9g3289 381 Pfam ENT domain 323 373 IPR005491 -
Sto9g3289 381 SUPERFAMILY ENT-like 320 376 IPR036142 -
Sto9g3289 381 PANTHER PLANT TUDOR-LIKE RNA-BINDING PROTEIN-RELATED 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3289 Sto-Chr9 32984080 32985605 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3289 - - gmx:100812171 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3289 9 32984080 32985605 Sto9g3289 9 32984080 32985605 ECH