Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3284 ATGGATGCTGCATCCGCCGGCTACCCATCTGGATTTGCCGTCCACTCCCAGAGGGAGTTTGGTTCTTCCCCTCGGAAAGTTGGCTGCTCAAGCTTTGAGTTTCCTCTTAATGTGGACGTTTCAAGAATTCGTTTGTGCCCAAGCTCTACTTCGTCCGCAGCTTCAAAGATGCAGGGATTAATAGACAGAATATGTGCACTTCCTAATATTGATGATTTCTACTGGGAGAAAAGCCCAACACCCATACTTGATGCTGTTGAAAATCCTCTTTGCTTGAAGAACCTAACTCTTAAGGAACTCAAGCAACTGGCTGATGAAATCCGTTTGGAATTGTCTTCAGTGATATCAGATGCACAAATCTCATCCAAAGCAAGTCTGGCAGTAGTCGATCTGACAGTTGCAATACATCATGTGTTTCACGCTCCAGTGGACAAGATCTTGTGGGATGTTGGAGATCAAACATATGCACATAAGATCCTTACAGGAAGGCGATCCCTCATGAAGACAGTCATGGATGCAACAGTATTTCTGCAGCACTTGAAAATGTATTTGGATTGGTATGAGATACAGCTTTCTGCAATGAACCTGGCCACTTCAGGCATGGCAGTTGCACGAGATATAAAGGGGAGGCGAGAACGTATAGTTGCAGTTATCAGCAATTGGACAATTATGGCTGGTCAGGTTTATGAGGCAATGGGCAATGCAGGGTATTTGGACTCAAATATGGTAGTGATTTTGAATGACAGCCATCACTCTTTACATCCAAAAGTTGAGGAGGGCACAAAGACATCTGTTAATGCACTATCTAGCACTCTAAGCAGGATCCAGTCCAGTAAATCCTTCCGAAAGCTTAGGGAAGTTGCTAAAGGTGTTACAAAACGTATTGGTGGAGGTATGCATGAATTGGCAGCTAAAGTTGATGAATACGCTCGTGGTATGATGGGTCCACTTGGCTCCACTCTTTTTGAAGAGCTTGGGTTGTACTACATAGGGCCTGTGGATGGACACAACATTGAAGAGCTAATATGTGTTCTAGAAGAAGTAGCCTCTCTTGATTCAATGGGCCCTGTCCTAATTCATGTAataactgatgaaaatcaaggaGCAGAATATAATCAGAAAAGTGACATGGTAGACAGGCAGCAGGATGATGGTTCCGTCGACTTTGATTCGTTACATCAAACTAATCAACCACGGACATATAGTGATTGTTTGGTTGAAACTTTAGTTATGGAAGCAGAGAAAGACAAAGATATTGTGGTAATTCATGCAGGAATTATGATGGAACCATCATTCCAACTGTTTCGAGAAAAACTGCCTGATAATTTTTTTGATGTGGGAATGGCTGAGCAACATGCAGTTACGTTTGCTTCTGGTTTGGCATGTGGTGGATTGAAGCCATTTTGCATAATACCTTCTTCCTTCCTACAAAGAGCTTATGACCAGGTGATCCATGATGTTGATCAACAGAAAATACCAGTGCGTTTTATCATTACAAGTGCAGGGCTGGTAGGTTCTGATGGTCCCCTCCATTGCGGAGCATTTGACATAACCTTCATGTCATGTTTGCCAAACATGATTGTCATGGCACCATCTGATGAGGTTGAACTCATGCACATGGTGGCTACTGCTCGTAATGTCAATGATCGGCCAATTTGCTTTCGGTATCCAAGGGGTGCTATAGTTGGGAACAACTACGCTGTTTGCAATGGAACACCCATTGAGATTGGAAAAGGGAGAGTTCTTGTTAAAGGTACAGAAATTGCTTTGCTGGGATATGGATCAATGGTTCAGAATTGCCTGAAAGCTCACGCTCTTCTTGCAAAGCTTGGCATTGAGGTGACCGTTGCTGATGCGAGGTTCTGCAAACCCCTGGACATCAATCTTCTTAGGCAGCTTTGTCAACATCATTCTTTCCTGATTACTGTTGAGGAAGGATCTATTGGAGGATTTGGTTCTCACGTTGCTCAATTTATTGCTCTTGATGGACAACTTGATGGAAGAGTTAagTGGCGACCTATTGTCTTACCAGACAGCTATATAGAGCATGCATCGCCAAACGAGCAGCTTGACCAGGCAGGGCTGACCGGACACCACATTGCCGCCACGGCATTGAGTTTGCTGGGTCGTACCCGTGAAGCCCTTCTTTTTATGTGTTCATGA 2163 0.4355 MDAASAGYPSGFAVHSQREFGSSPRKVGCSSFEFPLNVDVSRIRLCPSSTSSAASKMQGLIDRICALPNIDDFYWEKSPTPILDAVENPLCLKNLTLKELKQLADEIRLELSSVISDAQISSKASLAVVDLTVAIHHVFHAPVDKILWDVGDQTYAHKILTGRRSLMKTVMDATVFLQHLKMYLDWYEIQLSAMNLATSGMAVARDIKGRRERIVAVISNWTIMAGQVYEAMGNAGYLDSNMVVILNDSHHSLHPKVEEGTKTSVNALSSTLSRIQSSKSFRKLREVAKGVTKRIGGGMHELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEELICVLEEVASLDSMGPVLIHVITDENQGAEYNQKSDMVDRQQDDGSVDFDSLHQTNQPRTYSDCLVETLVMEAEKDKDIVVIHAGIMMEPSFQLFREKLPDNFFDVGMAEQHAVTFASGLACGGLKPFCIIPSSFLQRAYDQVIHDVDQQKIPVRFIITSAGLVGSDGPLHCGAFDITFMSCLPNMIVMAPSDEVELMHMVATARNVNDRPICFRYPRGAIVGNNYAVCNGTPIEIGKGRVLVKGTEIALLGYGSMVQNCLKAHALLAKLGIEVTVADARFCKPLDINLLRQLCQHHSFLITVEEGSIGGFGSHVAQFIALDGQLDGRVKWRPIVLPDSYIEHASPNEQLDQAGLTGHHIAATALSLLGRTREALLFMCS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3284 720 Pfam 1-deoxy-D-xylulose-5-phosphate synthase 83 363 IPR005477 GO:0008661|GO:0016114
Sto9g3284 720 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 80 461 IPR029061 -
Sto9g3284 720 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED 1 719 IPR005477 GO:0008661|GO:0016114
Sto9g3284 720 SMART Transket_pyr_3 399 564 IPR005475 -
Sto9g3284 720 Pfam Transketolase, pyrimidine binding domain 400 560 IPR005475 -
Sto9g3284 720 Gene3D - 74 370 - -
Sto9g3284 720 Pfam Transketolase, C-terminal domain 577 700 IPR033248 -
Sto9g3284 720 TIGRFAM dxs: 1-deoxy-D-xylulose-5-phosphate synthase 86 706 IPR005477 GO:0008661|GO:0016114
Sto9g3284 720 CDD TPP_PYR_DXS_TK_like 407 558 - -
Sto9g3284 720 Gene3D - 399 568 - -
Sto9g3284 720 SUPERFAMILY TK C-terminal domain-like 572 708 IPR009014 GO:0003824
Sto9g3284 720 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 392 561 IPR029061 -
Sto9g3284 720 Coils Coil 97 117 - -
Sto9g3284 720 Gene3D - 577 708 IPR009014 GO:0003824
Sto9g3284 720 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEIN 1 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3284 Sto-Chr9 32950943 32956548 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3284 K01662 - gmx:100787937 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3284 9 32950943 32956548 Sto9g3284 9 32950943 32956548 ECH