Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3272 ATGGCTAATATCTCAGAAGAAGCAGCCAACCGAATCCCCTTAGACTTTTCGTCAGTAAAGAGCTTACCCGATTCTCACGCATGGCCTCATCCTGGATGCTCCGATGGGTTATCTGGGTCGGGCTCCATACCCGTGGTGGACCTCATGGATCCTAATGCCATGGAAGCAATAGGCCTTGCATGTGAGAGCTGGGGTGCTTTCCAATTGAACAACCATGGGATTCCTTTGAGTCTTATTGAACAAGTGGAGGTGCAGGCCACGCGCCTCTTCACTCTCCCGGCCCACCGCAAGTTCAAAGCCCAAAGATCGCCGGGCAGCATCACCGGATACGGCCCAGCTCTCATATCGCCCTTCTTCCCCAAGTCCATGTGGCACGAAGGCTTCACCATCATAGGTTCTCCCTCTGACCACGCTAAAAGAATTTGGCCTTATGATCACGCACGGTTttgTGAAATCATGGAAAACTATCAGAAGCAAATGAAGAAACTAGCAGAGGAAGTGACACGCATGATTCTGAAGTTGGTGGGAGTAAGAGATGAAGAAAAAGAGTGGGTTGGGTCGAGCGAGAGTTCAGGAGCATTACAGTTGAACTGGTACCCTCCGTGTCCTGAGCCGGAGCGAGCCATGGGTCTAGCCCCACACACCGACACGTCGCTGCTAACCATACTGTATCAGGCCCAAACCAGTGGGCTCGAGATATTGAAGCAAGGAGAGGGGTGGGTTCCGGTGCGGCCACACCCAGGTGCGCTGGTGGTGCACGCTGGCGATCTGCTTCACGTCATGTCCAACGCCAGATTTCCGTCTGTGCTTCATCGCGTGACTGTGAATAGGACACGTCAGCGGTATTCCTTTGCGTATTTCTATGGGCCTCCGCAACACTGTGTTATTTCTCCTCCTGCTTTTCAAAACTCTGTTCCTCGTTTTCGTGCCCTCACTGTGAAGGAGTATATGGATATTAAGGCCAATAATCCAGATCTTGCGCTCTCTTCCATTACCATCGCTTCCACTCATTAG 1014 0.5178 MANISEEAANRIPLDFSSVKSLPDSHAWPHPGCSDGLSGSGSIPVVDLMDPNAMEAIGLACESWGAFQLNNHGIPLSLIEQVEVQATRLFTLPAHRKFKAQRSPGSITGYGPALISPFFPKSMWHEGFTIIGSPSDHAKRIWPYDHARFCEIMENYQKQMKKLAEEVTRMILKLVGVRDEEKEWVGSSESSGALQLNWYPPCPEPERAMGLAPHTDTSLLTILYQAQTSGLEILKQGEGWVPVRPHPGALVVHAGDLLHVMSNARFPSVLHRVTVNRTRQRYSFAYFYGPPQHCVISPPAFQNSVPRFRALTVKEYMDIKANNPDLALSSITIASTH 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3272 337 Pfam 2OG-Fe(II) oxygenase superfamily 195 290 IPR044861 -
Sto9g3272 337 Gene3D - 13 324 IPR027443 -
Sto9g3272 337 Coils Coil 146 173 - -
Sto9g3272 337 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 327 - -
Sto9g3272 337 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 189 290 IPR005123 -
Sto9g3272 337 SUPERFAMILY Clavaminate synthase-like 12 321 - -
Sto9g3272 337 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 143 IPR026992 -
Sto9g3272 337 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3272 Sto-Chr9 32893574 32894673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3272 43 316 Glycosyltransferase AT5G59530 29.900 2.44e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3272 K04124 - gmx:100818754 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3272 9 32893574 32894673 Sto5g0801 5 5443062 5445009 CCT