Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3257 atgttgaggaagaggaccaGGTCGCACCAGAAGGATCAAAATCTCATGGGTCATCTCTCAATCTCCAATGCTAATCGGGAGTACTATTCTCAGTCTCATCATGTTGTGGGAAGCAAGCTCAAAAACAACTCAATTTTCAATGTCCCTCGTTTGTTTGTGGGTTTGGTCCCTAATAGCTTGTTAGATTCTGATTCAATTAGGAGCCCCACATCTCCCCTTGATGTAGTGAAAATGTTTCCAAAATCATTACACCGTGAGGGCCAAAACCAGAGGAGCTGGGATTGCTGCAAAGTAGGCCTAAGCATAATAGATTCTTTGGAGGATTCTTCTAGATTTTCTGAGAAGATCCTCCCATCATCAGAGAGTAAGGATCCAATTATCAGTCCTCGAGTGAGGAGGATCAAATCCCCAAATTGTCTAAACTATACTGATTCTTTTGAGGCATCTAAGTCTTTACCCAAAGATTTTTGTAAGCTTCCTTATACCCAGAATGGATCTGCTACTATCCTAAACAAGGGTGTAGATTCCAATGTTCTCTTTGAGATTGGAGAAACCCACCTAGAGCATGAGCCACTTGGGAAAACTCGGTCTTGTTCGTTAGATTCTTGCAGTCCATTTAAACCCTTCCCTGGTTCTACTGGATTAGGAGGAAGCGATAACTCCAATACCTCACTGCTTACAGAATTGAATTCAAACCATGTATCAATATCCTCATCTCATGAATTTATTGAGTCTTTATCTGCGGGTGAGATTGAAAACTCTGAGGACTACACATGTGTGATTTCCCATGGTcccaatcccaaaaccactCGAATTTTCGGGGACTGCATCTTGGAAACTCATTCTGATGATCTTCGAATTTTTCCTTGTAAGAGTCTAGAGAAGGAAAATGGATTGCCACCAGTGGTTGTTAACTGCTCACAATCTCTAAACCAGTATCTTTCTAACGATTTCTTGAGTTTCTGTTACCACTGCAACAAGAAACTtgaagagggaaaagatatttacaTGTATAGAGGAGAAAAGGCATTTTGCAGTTTGACTTGCCGTGCCCTGGAGATCATGATCGACGAGGAACTCGAGAAATCTGATCCTTCTGAGAACTCTCCAGAGCCAGAAATTGGGGAGGAACTTTTTGAAACTGGAATCCTCACTACTTAA 1161 0.3945 MLRKRTRSHQKDQNLMGHLSISNANREYYSQSHHVVGSKLKNNSIFNVPRLFVGLVPNSLLDSDSIRSPTSPLDVVKMFPKSLHREGQNQRSWDCCKVGLSIIDSLEDSSRFSEKILPSSESKDPIISPRVRRIKSPNCLNYTDSFEASKSLPKDFCKLPYTQNGSATILNKGVDSNVLFEIGETHLEHEPLGKTRSCSLDSCSPFKPFPGSTGLGGSDNSNTSLLTELNSNHVSISSSHEFIESLSAGEIENSEDYTCVISHGPNPKTTRIFGDCILETHSDDLRIFPCKSLEKENGLPPVVVNCSQSLNQYLSNDFLSFCYHCNKKLEEGKDIYMYRGEKAFCSLTCRALEIMIDEELEKSDPSENSPEPEIGEELFETGILTT 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3257 386 ProSiteProfiles Zinc finger FLZ-type profile. 317 361 IPR007650 -
Sto9g3257 386 PANTHER DUF581 FAMILY PROTEIN 1 211 - -
Sto9g3257 386 PANTHER DUF581 FAMILY PROTEIN 215 381 - -
Sto9g3257 386 MobiDBLite consensus disorder prediction 360 386 - -
Sto9g3257 386 Pfam zinc-finger of the FCS-type, C2-C2 311 359 IPR007650 -
Sto9g3257 386 PANTHER FCS-LIKE ZINC FINGER 11 1 211 IPR044585 -
Sto9g3257 386 PANTHER FCS-LIKE ZINC FINGER 11 215 381 IPR044585 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3257 Sto-Chr9 32787766 32789044 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3257 - - gmx:100812576 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0778 5 5303144 5306800 Sto9g3257 9 32787766 32789044 CCT
Sto9g3257 9 32787766 32789044 Sto9g3257 9 32787766 32789044 ECH