Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3244 ATGCTTTTCCTACTCCTGAATGCAGCTTCAGATTCTAGATTACATGATGGAAACTGCTCAGTATTAGAGGAGAAGGTTGGAGCAGAAGAAGCATTGGAAAATGGGTTCCCCTCTTCCGAGCCCAGTCCTGCGGCAGTGAGAGGAGACAGAAGAGAAGAAGATCGAAAGGAAGAGTTTGTTGTCACAGAAAAAATGGAGCTGTCCCCCTCCTCTTCTGTGATCGCTCAGCAAACTTGGGAACTGGAGAACAACATCATCCCAATGGACACTCCCTCTACCACCGCCGACCAAGCTTCCGACGCCATCTTCTACTACGACGAGTCCGCCCAGACCGAATTCCAGAGAAGCAAGCCTTGGGTCAACGACCCCCACTACTTCAAGCGCGTTAAGATCTCCGCTCTCGCCCTTCTCAAGATGGTTGTTCACGCTCGCTCCGGTGGCACCATTGAGGTCATGGGTCTTATGCAAGGCAAGACCGACGGTGATGCTATCATCGTCATGGACGCCTTTGCTTTGCCCGTTGAAGGCACTGAGACTCGTGTTAATGCCCAAGCTGATGCCTACGAATACATGGTTGATTATTCTCAGACTAACAAGCAGGCTGGGCGTTTGGAGAACGTTGTTGGATGGTATCACTCTCACCCTGGTTATGGATGCTGGCTTTCGGGCATTGACGTGTCTACGCAGATGCTAAATCAGCAATTTCAGGAGCCCTTCCTGGCTGTTGTTATTGACCCAACAAGGACGGTTTCTGCTGGAAAAGTTGATATTGGAGCATTCAGGACATACCCAGAAGGTTATAAGCCTCCAGATGAGCCTATCTCTGAGTACCAAACCATCCCGCTAAATAAAATTGAAGACTTTGGTGTCCACTGTAAACAGTACTATGCGTTGGATATCACTTACTTTAAGTCATCTCTTGATTCACATCTCTTGGATCTTCTATGGAACAAATATTGGGTGAACACTTTATCTTCTTCTCCTTTATTGGGTAATGGAGATTACGTAGCTGGACAAATCTCCGATCTAGCTGAAAAGCTAGAACAAGCAGAGAATCAGTTGGCGCACCCACGCTTTGGGTCAATAATAGGCCCCCctcaaaaaaagaaaggaGTGAAAATCAGGCATAGGGAAGAATCTCCACTTGCTAAGATTACTCGTGATAGTGCAAAAATAACTGTAGAACAAGTACATGGCCTGATGTCACAGGTCATCAAGGACATCCTTTTCAACTCCGTACGTCAAGCAAacaaatctggtgtggaaacaTCTGGGCCTGAACCAATGATTGAAAGCTGA 1299 0.4596 MLFLLLNAASDSRLHDGNCSVLEEKVGAEEALENGFPSSEPSPAAVRGDRREEDRKEEFVVTEKMELSPSSSVIAQQTWELENNIIPMDTPSTTADQASDAIFYYDESAQTEFQRSKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVDIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHPRFGSIIGPPQKKKGVKIRHREESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQANKSGVETSGPEPMIES 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3244 432 MobiDBLite consensus disorder prediction 31 54 - -
Sto9g3244 432 PANTHER BNAC07G13420D PROTEIN 90 424 IPR037740 GO:0004222|GO:0008180
Sto9g3244 432 CDD MPN_RPN11_CSN5 118 396 - -
Sto9g3244 432 ProSiteProfiles MPN domain profile. 129 266 IPR037518 -
Sto9g3244 432 Pfam Cop9 signalosome subunit 5 C-terminal domain 325 411 IPR040961 -
Sto9g3244 432 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 126 237 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto9g3244 432 Gene3D Cytidine Deaminase, domain 2 68 331 - -
Sto9g3244 432 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 90 424 - -
Sto9g3244 432 SUPERFAMILY JAB1/MPN domain 128 265 - -
Sto9g3244 432 SMART pad1_6 128 265 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3244 Sto-Chr9 32691419 32696674 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3244 K09613 - mnt:21385869 660.988