Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3204 ATGGCTTCTGGCTCGCCTCGCGGCCGTATCGATCAGGTCCTTCTCCATTCTGATTTAGAGTTTGCGAACCCTAGGTGTGCCATTCACTGGCTCATTGTGTGTGTTCGTGTTCCGCGTTCTTCTAGTCTTTCTTTGGCGTCATCAACGGAACCGATACTGACCGTTTTCTTCGTTTCAAAGAAAAGGAAGGCATTGTCACCCGTTTCTAAATCTGGAAGATCTGAAAAAGGTGCAAGAAATACAGTCGATGGATCTCCAAATGCTAAAGGTACCCTGGACAGTTACTTGGTTACTTCGCAGCAAACTTGCTGTACTGCAGGGCTGTCATACACGACCGGTGATTCTTTAGCTAGGGAGCGTGGAGTTAAAAGAAATTTGGTGCCTGTGATTAATAGTTCCTTTGACAATGAAAATAAGCAACCTGTTCCATCAGCTCAATTGCATCAATGTTCTCAAGCAACTGAGAAGGGACTAACAAATGAATTACCCAAGGTGAGTGATGAAGCAGTTGAAAAACCTGCCCAAGAAAATTGCTTCGATTGCAGACAGGGAGTGGAAAACTTGGAACTCAAACAGTTTGCAGCAGACTTTTTGTCTTTGTACTGTAGTGATGTACACCCAAGCATTAATTCTCCATCAAAGCTGAAGGTAGATGACCGTAGGAGTCAAGGTGCCTTAACATATCTAGAGAGGAAGAGTAGTTTACCCCAGAAGTGTAATGAAACCGGCAGTGAGCCACATTTTGGtgataaaaacattttattctTTGACAAAAACTCTGATGACATCAAGACAGATGTTGTTAGTAATGCTTCAGCATCTGTTCCTGGCCATTACACAAAGGTTTCTACTGGTGATGATTTTAATTCCCTGGACAGAAGCTTTAAAAGATGTAGTTTTACACCAAAATCATCTGTGAATAAGACTGAGTGCTATACACCAGGATCCTTGGTTGTTAAAACAGGCGTTAAGGAGACCCCAACGTCGACACGTGGGAGCTCAATGTTTTCACCTGGAGAGGCATTTTGGAATGAAGCAATTCAACTAGCTGATGGTTTGTGTGCTCCCATGGCTAATACTTCTTCTGAGATTATTGGAGATACTAATGTGGCAGATGACCAAGTTTGTGGGAAGAACTCATGTAATGTACAAAACAATGAGGTCAGGCCAAGGAAAACATTGGATCACAATGAAAGCATAATTGAGGATCTGGAAAAGGGCAGTCCTTTTCAATCGAGGACAGCTCATGCTAAAGATTCAGTGAAAGAAGTGTCCAGCCTGCCTGTTAAGCATTTTGATTTTTCATTCGAGGACACTAATTTGGATGAAAATTCCCCACAACAAAGTCATGCTGGTGATCTGATTAGTGTTACTCATAATGCTCATAAACAGTATGAATCCAGTTCAGTCAACACTAAGAAAGCGAACAATAGCAAGAACTTTACTATAGTTGGGGCAGCTCATACAAAAGAAAAGACAAATGAAGTGCAAGAGAGGACTTCAGTCCAAGCTGTGTGCCAAAAGTTGAATTTACCAAGTCAGGATAATGATAGTTTGACATCTACTTCACCCCTTAGTGAAGTCAGGACACTAATTGTTACTCATCCATCTGATGAAATCAGTACACCTTCAAGCAATGTGTTACTTAATGACCATCTAAACCTAAACAGGTGGCTTTTGCCTGAAATTTGCAGCATATATAGAAAGAAAGGAATCTCAAAGCTTTATCATTGGCAGGTTGATTGCCTTCAGGTGGAAGGTGTCTTGCAGAGAAAAAATCTTGTTTATTGTGCTTCTACAAGCGCTGGTAAGAGTTTTGTTGCTGAGATTTTAATGCTAAGGAGGGTGATTTTAACGGGGAAAATGGCAATGCTTGTTCTTCCATATGTATCAATATGCACAGAAAAGgcAGAACACCTCGAGCATCTTCTTGAGCCACTTGGTAAACATGTACGTAGTTATTATGGAAACCAAGGTGGTGGAACACTTCCTAAAGATACTTCTGTAGCTGTATGCACAATAGAGAAGGCAAACTCCTTAATTAATAGATTATTGGAAGAGGGCCGTCTATCTGAAATGGGGATTATTGTGATAGATGAACTGCATATGGTTGGTGATCCAAGTAGAGGTTATCTTCTAGAGCTTATGTTGACAAAGCTTCGTTATGCATCTGGAGAAGGTCATTCAGAATCAAGTAGTGGAGAAAGTTCAGGTGGTAGCAGCAACAAGGCTGATCCTGCTATTGGACTGCAGATAGTTGGGATGAGTGCAACAATGCCAAATGTTGCAGCAGTTGCTGATTGGCTTCAAGCAGCACTATACCAGACAGAGTTTCGACCAGTACCCTTAGAGGAATATATTAAAGTTGGTAATTGCATTTATAACAAGAGAATGGAACTTGCTAGAACAATCTCAAAAGCAGCTAACCTTGGTGGTAAAGATCCTGATCATGTTGTTGAACTGTGTAATGAGGTTGTTCAAGAGGGACATTCAGTGTTAATATTTTGCTCTAGCAGAAAGGGATGTGAATCAACGGCAAGGCATGTGGCAAAGttccttaaaaaatttacagTTGATGTTCAAAAAAATGATTGTGAGTTTGCTGATATTACTTCAGCTATTGACTCTTTGAAAAAGTGCCCTGCTGGGTTGGACCCTATATTAGAGGAGACACTTCCTTCTGGCGTTGCTTTTCACCATGCTGGCCTTACgGTTGAGGAAAGAGAGATTATTGAAACCTGTTACCGCAGAGGCCTTTTACGTGTCTTAACTGCTACATCAACCTTAGCTGCTGGAGTTAACCTGCCGGCTAGGAGAGTCATATTCCGCCAGCCTAGAATTGGTCGTGATTTTATTGATGGGACAAGGTACAAACAGATGGCTGGTCGGGCTGGTCGAACTGGAATTGATACAAGAGGAGAAAGCGTACTTATTTGCAAACcagaagagataaaaaaaattatgggacTTCTTAATGAGAGCTGTCCACCATTACATTCATGTTTATCTGAGGATATGAATGGAATGACCCATGCAATCTTAGAGGTTGTGGCAGGAGGAATAGTTCAAACTGCTAATGATATTCATCGTTATGTTAGATGCACTCTTTTGAACTCCACAAAACCTTTTCAAGATGTGGTGAAATCAGCACAAGAATCCCTTCGATGGTTGTGTCAGAGAAGATTCCTTGAATGGAATGAAGAGACTAAACTCTACAGTACCACACCTCTTGGGCGTGCAGCTTTTGGCAGTTCTCTCTGTCCAGAAGAATCACTTATTGTGCTGGCTGATCTTTCAAGGGCAAGAGAAGGATTTGTCCTTGCATCAGACTTGCATTTAGTTTACTTGGTGACACCAATCAATGTTGATGTTGAGCCAGATTGGGAACTATACTATGAGCGTTTTGTGCAATTGTCTCCGCTTGATCAGGCGGTAGGCAATCGAGTGGGTGTGACAGAACCATTCTTGATGCGCATGGCACATGGTGCACCGTTATGCACTTCAAACAAGTCAAGAGAAAAAGCGAAATGGCAGAACAATAAACGAGGAAATCAAGTTGGGATATCCAGTGGAACAATTAACTCGGATGATCAAATACTGCGTGTCTGTAAAAGATTCTATGTTGCTCTTATTTTGTCAAGACTAGTTCAGGAAACACCTGTGGGTGAGGTTTGTGAAGCTTTTAAAGTTGCCAGAGGAATGGTTCAAGCCTTACAAGAGAATGCTGGAAGGTTTGCATCAATGGTTTCTGTGTTCTGTGAGAGGCTTGGATGGCATGATCTTGAAGGCTTGGTTGCAAAGTTTCAAAATCGTGTATCATTTGGAGTTAGAGCAGAGATTGTGGAGCTTACTACTATTCCATATGTTAAGgGTTCTCGAGCCAGAGCACTCTATAAAGCAGGTTTACGTACACCTCTTGCAATTGCTGAAGCATCTATTGCTGAAATTGTAAAAGCACTTTTTGAATCTGTATCATGGGCAACAGAAGGTTCTGCACAAAGGCGTTTACAAGTTGGTGTAGCCAAGAAGATAAAGAATGGTGCTCGCAAGATTGTTCTTGATAAAGCTGAAGAGGCAAGGGCTGCTGCCTTTTCAGCCTTTAAGTCACTTGGCTACAATGTCCCACATTTTGCTCCACCAATATTATCCACTGCTGCTTGTGATTCTAATAGGCAAGGAGCAGGAGGTACCTCCTCCGGAAATGACACAGCAGACACTAATCATAGCTTTGTTGATGTAGACCACGTGGAAAGTTCTGATCAAGGTCCTTTAgataaagaaagagaatatgTGACAAAATCATCTGATAATGGTGTTCTGATAGAAGGAAAATCAAGCAATGCAATGCCATATGGTTTGTCTTCTGAAAAGTCTCTGGTTCCAGTTGAAGACTCTCTTATGATAAAGGGTGGACTCAATGTTACTTTCGATTCTACCAAAAAAACAGTTATGGCCACCACCTCTGATAAGTCACAGAAACCAAATGATAAAACCAGAATAGTTGATGGGTGCCCTGGTCATGGTATAAAGGAACAACATTTGATGGAAAATGTTGCTGTTAGCAACAGGGGTAGTCCATGTCAGGGAGGTCCTATTAATGCAATTAGTATTCCTGGTGGACTTGACTCATTTTTGGATCTATGGGACAGTACACCAGAGTTCTACTTCGATGTCCACTACAACAAACGATCGGAACTGAATTCTGCTGCCCCTTTCGAAATACATGGTATAGCCATCTGTTGGGAAAACTCTCCTGTGTACTATATTAATCTTCCCAAGGATCTTCTGTTGTCTGACAATAGAAAAGATGACCTCATTTCCTTGAGTGCATGCAGTAATAAACATAAGGTTTTATATTCTAAGAATGATTTGGAGATTCCTAGGCATAGATGGAGCAAGATTCATAAAATAATGGGGAAAAGGGATGTCAGAAAGTTCTCCTGGAATTTGAAGACTCAGATTCAGGTGCTTAAAAAGCCTGCAGTTTCAGTTCAGAGATTTGGTTGTCTGGATTATTCTGGAAATAATATGGACCTTGAAGTTGTAGACAACTCATACATCTTATTGTCCCCCATCCATGTTGAAGCTGCAATTGACATGTGCATTGTGGCTTGGATTCTTTGGCCTGATGAAGAGAGGAGCTCCAACCCAAACCTTGAGAAGGAAGTGAAGAAAAGGTTATCCAGTGAGGATGCTGCAGCAGCTACTCGGAGTGGAAGGTGGAAGAATCAGATGCGTAGAGCTGCACACAATGGCTGCTGCCGTCGGGCTGCACAAACACGTGCATTATGTTCTGCTATGTGGAAATTACTTGTTTCTGAGGAACTTCTTGAAGTGCTTATGAGCATAGAGATCCCATTGGTAAATGTTCTTGCTGACATGGAGCTCTGGGGAATTGGTGTTGACTTGGAGAGGTGCATCCAGGCTCGTAAATTGTTGACGAAAAGACTAAGGTATCTTGAGAAAGAAGCTTATAAGCTAGCTGGGATGACATTTTCATTGCATATGCCAGCAGATATTGCAAACGTACTGTTTGAACACTTGAAACTGCCCATACCTGATGGGTGCAATAAGGGAAAACAACATCTGAGCACTGACAAGCACTGTTTGGATGCACTAAGGCATGAGCATCCCATTGTTCCAGTTATTAAAGAGTATCGTACATTGGCAAAGCTCTCAAACTGCACTCTAGGATCAATTTGTTCACTTTCTAGGCTCTCTATAAGCACACAGAAGTACACATTACATGGTCATTGGCTCCAGACATCGACAGCAACTGGTCGGCTCTCAATGGAGGAACCTAATCTTCAGTGTGTTGAACATAAGGTGGACTTCAAAATGAAAGAGGATAAAAACGGAGGTGATGCTGATGAGCATCACTGTATAGTTAATGCTCGAGATTTCTTTGTTCCTAGTCAGGTAAATAGAGTTTTCCTCCCTTCCCTCATTTCAACATCCAAACAGCAGGACAATTGGTTGCTGTTAACAGCAGATTATTCTCAGATAGAATTGAGGTTGATGGCTCACTTCTCAAAAGACTCTTCACTTATTGAGCTTCTCAGTAAGCCTCATGGTGATGTCTTTACAATGATAGCAGCTAGATGGATAGGGTGTTCTGAGGATTCTGTAGACACCCGTGAAAGAGATCAGACCAAAAGGATGGTGTATGGCATTCTTTATGGTATGGGTGCCAATAGCCTTGCTGAACAATTGGATTGCACTTCAGATGAAGCTGCAGAAAAGATTAAAAACTTCAAAAGCTCTTTTCCTGGTGTTGCTTCTTGGCTTAAGGAAGCTGTTGCATCTTGTCGTAGCAAAGGATATGTGGAGACTCTCAAGGGTAGAAAAcgatttttgtcaaaaataaaagttggcAGCAGTAAAGAAAAATCAAGAGCTCAGAGGCAAGCTGTGAATTCCATTTGTCAgGGTTCTGCCGctgatataattaagattgcAATGTTAAGAATTTACTCTGTAATTGTGGATGGCATTGATAGCCCAGGCTCCAGTTCTTCATTAGCGACCAATTTTGATATCCTTAGGAATCGGTGCCGGATTCTGTTACAGGTACATGATGAATTAGTGCTGGAAGTTGATCCTTCTGTTATAAAGGAAGCTGCCCTGCTGTTACAGACTAGCATGGAGAATGCTGTCTCACTTCTTGTTCCTTTGCAAGTTAAACTTATGATTGGGAGAACATGGGGATCTCTGGAGCCTTTCGCTCTAGATAAATTCAAAGATGATGCTCACAGCACCCACTCCTAA 6768 0.4105 MASGSPRGRIDQVLLHSDLEFANPRCAIHWLIVCVRVPRSSSLSLASSTEPILTVFFVSKKRKALSPVSKSGRSEKGARNTVDGSPNAKGTLDSYLVTSQQTCCTAGLSYTTGDSLARERGVKRNLVPVINSSFDNENKQPVPSAQLHQCSQATEKGLTNELPKVSDEAVEKPAQENCFDCRQGVENLELKQFAADFLSLYCSDVHPSINSPSKLKVDDRRSQGALTYLERKSSLPQKCNETGSEPHFGDKNILFFDKNSDDIKTDVVSNASASVPGHYTKVSTGDDFNSLDRSFKRCSFTPKSSVNKTECYTPGSLVVKTGVKETPTSTRGSSMFSPGEAFWNEAIQLADGLCAPMANTSSEIIGDTNVADDQVCGKNSCNVQNNEVRPRKTLDHNESIIEDLEKGSPFQSRTAHAKDSVKEVSSLPVKHFDFSFEDTNLDENSPQQSHAGDLISVTHNAHKQYESSSVNTKKANNSKNFTIVGAAHTKEKTNEVQERTSVQAVCQKLNLPSQDNDSLTSTSPLSEVRTLIVTHPSDEISTPSSNVLLNDHLNLNRWLLPEICSIYRKKGISKLYHWQVDCLQVEGVLQRKNLVYCASTSAGKSFVAEILMLRRVILTGKMAMLVLPYVSICTEKAEHLEHLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEMGIIVIDELHMVGDPSRGYLLELMLTKLRYASGEGHSESSSGESSGGSSNKADPAIGLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIKVGNCIYNKRMELARTISKAANLGGKDPDHVVELCNEVVQEGHSVLIFCSSRKGCESTARHVAKFLKKFTVDVQKNDCEFADITSAIDSLKKCPAGLDPILEETLPSGVAFHHAGLTVEEREIIETCYRRGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMAGRAGRTGIDTRGESVLICKPEEIKKIMGLLNESCPPLHSCLSEDMNGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCQRRFLEWNEETKLYSTTPLGRAAFGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERFVQLSPLDQAVGNRVGVTEPFLMRMAHGAPLCTSNKSREKAKWQNNKRGNQVGISSGTINSDDQILRVCKRFYVALILSRLVQETPVGEVCEAFKVARGMVQALQENAGRFASMVSVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIAEIVKALFESVSWATEGSAQRRLQVGVAKKIKNGARKIVLDKAEEARAAAFSAFKSLGYNVPHFAPPILSTAACDSNRQGAGGTSSGNDTADTNHSFVDVDHVESSDQGPLDKEREYVTKSSDNGVLIEGKSSNAMPYGLSSEKSLVPVEDSLMIKGGLNVTFDSTKKTVMATTSDKSQKPNDKTRIVDGCPGHGIKEQHLMENVAVSNRGSPCQGGPINAISIPGGLDSFLDLWDSTPEFYFDVHYNKRSELNSAAPFEIHGIAICWENSPVYYINLPKDLLLSDNRKDDLISLSACSNKHKVLYSKNDLEIPRHRWSKIHKIMGKRDVRKFSWNLKTQIQVLKKPAVSVQRFGCLDYSGNNMDLEVVDNSYILLSPIHVEAAIDMCIVAWILWPDEERSSNPNLEKEVKKRLSSEDAAAATRSGRWKNQMRRAAHNGCCRRAAQTRALCSAMWKLLVSEELLEVLMSIEIPLVNVLADMELWGIGVDLERCIQARKLLTKRLRYLEKEAYKLAGMTFSLHMPADIANVLFEHLKLPIPDGCNKGKQHLSTDKHCLDALRHEHPIVPVIKEYRTLAKLSNCTLGSICSLSRLSISTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHKVDFKMKEDKNGGDADEHHCIVNARDFFVPSQVNRVFLPSLISTSKQQDNWLLLTADYSQIELRLMAHFSKDSSLIELLSKPHGDVFTMIAARWIGCSEDSVDTRERDQTKRMVYGILYGMGANSLAEQLDCTSDEAAEKIKNFKSSFPGVASWLKEAVASCRSKGYVETLKGRKRFLSKIKVGSSKEKSRAQRQAVNSICQGSAADIIKIAMLRIYSVIVDGIDSPGSSSSLATNFDILRNRCRILLQVHDELVLEVDPSVIKEAALLLQTSMENAVSLLVPLQVKLMIGRTWGSLEPFALDKFKDDAHSTHS 2255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3204 2255 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 817 1014 IPR001650 -
Sto9g3204 2255 Gene3D Taq DNA Polymerase; Chain T, domain 4 1798 1905 - -
Sto9g3204 2255 CDD DNA_pol_A_theta 1798 2238 - -
Sto9g3204 2255 Pfam Helicase conserved C-terminal domain 817 968 IPR001650 -
Sto9g3204 2255 MobiDBLite consensus disorder prediction 1389 1408 - -
Sto9g3204 2255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 559 783 IPR027417 -
Sto9g3204 2255 Pfam Helix-turn-helix domain 973 1064 IPR046931 -
Sto9g3204 2255 Gene3D - 2002 2146 - -
Sto9g3204 2255 SMART ultradead3 571 790 IPR014001 -
Sto9g3204 2255 PANTHER DNA POLYMERASE THETA 575 2243 - -
Sto9g3204 2255 MobiDBLite consensus disorder prediction 73 89 - -
Sto9g3204 2255 Gene3D - 1155 1299 - -
Sto9g3204 2255 Pfam DNA polymerase family A 1805 2236 IPR001098 GO:0003677|GO:0003887|GO:0006260
Sto9g3204 2255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 775 996 IPR027417 -
Sto9g3204 2255 SMART polaultra3 1965 2203 IPR001098 GO:0003677|GO:0003887|GO:0006260
Sto9g3204 2255 MobiDBLite consensus disorder prediction 1389 1407 - -
Sto9g3204 2255 CDD SF2_C_Ski2 779 980 - -
Sto9g3204 2255 MobiDBLite consensus disorder prediction 67 89 - -
Sto9g3204 2255 Pfam DEAD/DEAH box helicase 588 761 IPR011545 GO:0003676|GO:0005524
Sto9g3204 2255 SUPERFAMILY DNA/RNA polymerases 1776 2238 IPR043502 -
Sto9g3204 2255 SMART helicmild6 886 968 IPR001650 -
Sto9g3204 2255 PRINTS DNA-polymerase family A (pol I) signature 1915 1937 IPR002298 GO:0003887|GO:0006261
Sto9g3204 2255 PRINTS DNA-polymerase family A (pol I) signature 2186 2199 IPR002298 GO:0003887|GO:0006261
Sto9g3204 2255 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 585 777 IPR014001 -
Sto9g3204 2255 CDD DEXHc_POLQ-like 559 780 - -
Sto9g3204 2255 Gene3D - 1924 2235 - -
Sto9g3204 2255 Gene3D - 1533 1795 IPR036397 GO:0003676
Sto9g3204 2255 MobiDBLite consensus disorder prediction 1413 1443 - -
Sto9g3204 2255 SUPERFAMILY Sec63 N-terminal domain-like 1197 1313 - -
Sto9g3204 2255 MobiDBLite consensus disorder prediction 1413 1433 - -
Sto9g3204 2255 Gene3D - 559 780 IPR027417 -
Sto9g3204 2255 Gene3D - 789 988 IPR027417 -
Sto9g3204 2255 PANTHER DNA POLYMERASE I 575 2243 IPR002298 GO:0003887|GO:0006261
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3204 Sto-Chr9 32438264 32451963 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3204 K02349 - gmx:100813857 3097.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3204 9 32438264 32451963 Sto9g3204 9 32438264 32451963 ECH