Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3177 ATGTCGCGGTTGGGTGACGATGAATTAGGTTTGATCCTCAGTTTCATTTGTGACCACAACGACAGGAAATCTTTCTCCCAAGTCTCCAAGCACTGGCTTCGTGTGGAAGGTCTCACTCGTTCATCCATACGCCTCCTCGAACCCCATTCCCTTCCTACCCTAATAACCCGATTCCCTAATCTACGCAAATTTGAATCTTCAAAACCAATCTCCGACCATCACCTTCTGATTTTAGCCCAAACTTGCCCTAAACTCGAGCTTATCAACCTCAATTTCAGACTAAAGCATGGAATGCCAGACTACTTTGATGAACCCTCGTGTTTCGAAGACGTCGGAGACGACGGTATGTGCGCTTTGGCGGCTGGGTGTCACAGATTGTTCCAAGTTTCGCTTCGACGAAGAAAGAATATTGCGAATGCCGGAATTGTTTCACTTTCTAATTCAGCGAAGCATCTGAGGCATTTGGATTTGAGTTGGTGTAATTTGATTACGGACGACGCCCTTGAAGCAATTGGGGCAGCCAAATCGGTTGCTGTCCTCAATCTACAAGGCTGTTCCTTAATCACGGATTTTGGGCTAGCATATTTAGCTTTGGGGTCTCCGTCTAAGTCTTTGAAAAAATTGGTTCTGGCAGAATGCGATCGAATCACGGACTCTGGTGTGTGTCTTTTGCAGAAAATTTCTGGTTTGGAGGAGCTAAATATAGCAGAATGTGGGCCTAAGGTGACAGACACAGGGTGCTTGGCAATCTCAGAAATTCAAACTCTAAGGAAGCTGAATCTATCGTGGATGGTTAATGTGTCTGATACAACAGTGATTGCACTTGCTGAGCACAGCAAGAAATTGGAGACGGTTGATTTCACAGGATGTGAATTAATAAGTGGAGCTGGCTTTCGTGCTTTTGCGAATCATGGGAGTTTGGAAGTTATTGTATTGGCTTCTTGCTACAACATTTGTGCAGATGATGTTGAATACACAGTGCTTAGATGTAAGTCATTGAGGTATGCTGTGCTTGATAAAGGACTTAGAATGTGGATTTCAATGGCTGCGCTGGACAATATTAGCAGATTCTGCGAGTTGCGTTGGAGATGA 1092 0.4451 MSRLGDDELGLILSFICDHNDRKSFSQVSKHWLRVEGLTRSSIRLLEPHSLPTLITRFPNLRKFESSKPISDHHLLILAQTCPKLELINLNFRLKHGMPDYFDEPSCFEDVGDDGMCALAAGCHRLFQVSLRRRKNIANAGIVSLSNSAKHLRHLDLSWCNLITDDALEAIGAAKSVAVLNLQGCSLITDFGLAYLALGSPSKSLKKLVLAECDRITDSGVCLLQKISGLEELNIAECGPKVTDTGCLAISEIQTLRKLNLSWMVNVSDTTVIALAEHSKKLETVDFTGCELISGAGFRAFANHGSLEVIVLASCYNICADDVEYTVLRCKSLRYAVLDKGLRMWISMAALDNISRFCELRWR 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3177 363 PANTHER OS03G0633100 PROTEIN 1 339 - -
Sto9g3177 363 Pfam F-box 3 41 IPR041567 -
Sto9g3177 363 Gene3D - 1 40 - -
Sto9g3177 363 Gene3D Ribonuclease Inhibitor 100 179 IPR032675 -
Sto9g3177 363 SMART LRR_CC_2 228 253 IPR006553 -
Sto9g3177 363 SMART LRR_CC_2 256 278 IPR006553 -
Sto9g3177 363 SMART LRR_CC_2 202 227 IPR006553 -
Sto9g3177 363 SMART LRR_CC_2 279 304 IPR006553 -
Sto9g3177 363 SMART LRR_CC_2 123 148 IPR006553 -
Sto9g3177 363 SMART LRR_CC_2 149 174 IPR006553 -
Sto9g3177 363 SMART LRR_CC_2 180 199 IPR006553 -
Sto9g3177 363 Gene3D Ribonuclease Inhibitor 199 360 IPR032675 -
Sto9g3177 363 SUPERFAMILY RNI-like 50 319 - -
Sto9g3177 363 Pfam Leucine Rich repeat 278 302 IPR001611 GO:0005515
Sto9g3177 363 Pfam Leucine Rich repeat 150 171 IPR001611 GO:0005515
Sto9g3177 363 Pfam Leucine Rich repeat 203 221 IPR001611 GO:0005515
Sto9g3177 363 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 1 339 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3177 K10268 - qsu:112029922 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3177 9 32228033 32229124 Sto9g3177 9 32228033 32229124 ECH