Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3173 ATGGACTCTCTATCCTCCTCCACCAACACTTCTTCTTTCCCTCGCTTCAAACACTCCCAACCCATCTCCGATCGAATCCTCCGAGCCCTCCGCCAccgcctcctcctcctccaccgcTCCGATTCCTCCTTCTTCATCCTCGGCGCCACCGGCAACGTCTACACTGTCACCCTCTCTTCCTTCCCCTCCTGCTCCTGCCCCGACCGCACCTCCCCCTGCAAGCACATTCTCTTCGTTTTCATCCGTGTCCTCGGCGTCTCCCTCGACGACGTCTCCCTCCGCCGCCGCTCCCTCCGCCCCTGCCACCTCCGCCGCCTCCTCACCACCCCCACCTCACCGGACTCCGTCGCTGGGGCCGCCCTCCGCGAGAGATTTCACCAGCTTTTCTTCACCCAAAGGCAGGGATCAGGATCAGGATCAGGGACGTCTAGTGCGAGCAGCATCGAGGTAGAGGATGGAAGCACTTGCCCTATTTGCCTTGAAGAGATGGGGAAGGAAGACATGGTTGTAGCCTGCGCCACGTGTCGGAACCCCATTCATGAAGATTGCTTGGACGACATCCACAATATGCCCCAAACTGTTACTGCTGGAGATAGGGATGGGGGTGGCTCTCCATGCTCTGCCTAA 627 0.5726 MDSLSSSTNTSSFPRFKHSQPISDRILRALRHRLLLLHRSDSSFFILGATGNVYTVTLSSFPSCSCPDRTSPCKHILFVFIRVLGVSLDDVSLRRRSLRPCHLRRLLTTPTSPDSVAGAALRERFHQLFFTQRQGSGSGSGTSSASSIEVEDGSTCPICLEEMGKEDMVVACATCRNPIHEDCLDDIHNMPQTVTAGDRDGGGSPCSA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3173 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 194 IPR013083 -
Sto9g3173 208 ProSiteProfiles Zinc finger SWIM-type profile. 54 84 IPR007527 GO:0008270
Sto9g3173 208 SUPERFAMILY RING/U-box 147 193 - -
Sto9g3173 208 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 11 186 IPR039903 GO:0061630
Sto9g3173 208 Pfam SWIM zinc finger 54 82 IPR007527 GO:0008270
Sto9g3173 208 PANTHER - 11 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3173 Sto-Chr9 32210888 32211655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3173 - - gmx:100775505 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3173 9 32210888 32211655 Sto9g3173 9 32210888 32211655 ECH