Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3161 ATGGAGAAAGAATTGAAGGGAAAATGGGAAGGGAAGGTTTCAACGACGGTGACGAAAGCTAGAGCAGATGAGATATGGGAGCTTTTGAAGGACTTCTTCAACTTGCACAAATGGTTCCCCACCCTAGCCACCTCCTACGGCATCCATGGCTCTAACTCTGAGCCCGGCTGCATCCGATACTGCGCTGGCTTCTCCATCCCATCCAACGCCCCCAATCACCCTATCAGCTGGTCAAAGGAGAGACTCATAGCCATTGATCACCATGATCGCACCCTCGATTATGAAATTGTAGATAGCAATATCGGCTTCAACTCCTACAAGTCCACCCTCAAGGTCATCCCCAACGAAACCACACACGGATGCGTCATCCACTGGTATTTCACTCTCGATCCCATGGAAGGCTGGCTGCTACACGACCTCATTGCCAAATACGATGTGGGCCTTCAACGCATGGTTGCCAAAATGGAGGATCATATtgtaaattcaaaaaaAAAAATGGCAGAGGAATCCAACCCTAGATGGGAAGGAAAAGCCTGTGTGGAGCTTCCAAACACAGATGTAGAAAAAGTATGGGTTGTGTTGGGGGATTTCTGCAATGTTCACAAATGGATGCCCATAGACACATGCTATCAACTAGAGGGGATTCCAGGTCAGCCTGGGCTCATCCGCTACTGCGCTACCACCGTAACAGCTGAATCTGAGAAAACCACAATCAGGTGGGCCAAAGAGAAGCTAATCGCCATAGATCCCGTGGAACGCAGTTTCAGCTATGAGATTGTTGATAATAACATAGGATTCAAGTCCTATGTGACCACAATCAAAGTGTTGACACAGGATGAGAAACGAGGGTGCAAGGTCGAATGGTCGTTTGTAAGTGATCCAGTACAAGGGTGGACATTCCAAGGTTTGAACTCTTATATTGAGTCTTGTCTCCAGTTACTGCTCAATAAGATGGAGATGCCATGTTCTGCTACTTAG 978 0.4703 MEKELKGKWEGKVSTTVTKARADEIWELLKDFFNLHKWFPTLATSYGIHGSNSEPGCIRYCAGFSIPSNAPNHPISWSKERLIAIDHHDRTLDYEIVDSNIGFNSYKSTLKVIPNETTHGCVIHWYFTLDPMEGWLLHDLIAKYDVGLQRMVAKMEDHIVNSKKKMAEESNPRWEGKACVELPNTDVEKVWVVLGDFCNVHKWMPIDTCYQLEGIPGQPGLIRYCATTVTAESEKTTIRWAKEKLIAIDPVERSFSYEIVDNNIGFKSYVTTIKVLTQDEKRGCKVEWSFVSDPVQGWTFQGLNSYIESCLQLLLNKMEMPCSAT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3161 325 Pfam Polyketide cyclase / dehydrase and lipid transport 13 156 IPR019587 -
Sto9g3161 325 Pfam Polyketide cyclase / dehydrase and lipid transport 184 318 IPR019587 -
Sto9g3161 325 CDD PYR_PYL_RCAR_like 184 319 - -
Sto9g3161 325 PANTHER OS05G0202300 PROTEIN 1 159 - -
Sto9g3161 325 PANTHER OS05G0202300 PROTEIN 166 321 - -
Sto9g3161 325 CDD PYR_PYL_RCAR_like 9 156 - -
Sto9g3161 325 SUPERFAMILY Bet v1-like 15 161 - -
Sto9g3161 325 Gene3D - 3 166 IPR023393 -
Sto9g3161 325 Gene3D - 167 323 IPR023393 -
Sto9g3161 325 PANTHER LACHRYMATORY-FACTOR SYNTHASE 1 159 - -
Sto9g3161 325 PANTHER LACHRYMATORY-FACTOR SYNTHASE 166 321 - -
Sto9g3161 325 SUPERFAMILY Bet v1-like 184 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3161 Sto-Chr9 32146090 32147535 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3161 - - rcu:8275674 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0669 5 4505594 4506058 Sto9g3161 9 32146090 32147535 CCT
Sto9g3161 9 32146090 32147535 Sto9g3161 9 32146090 32147535 ECH
Sto5g0669 5 4505594 4506058 Sto9g3161 9 32146090 32147535 ECH