Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3133 ATGGCGTCTTTTCGACGGACTTTGTCGCCGGCGTACCACGATCGGCAATACCAGAACGGTGTTGGAGCCTTTTCTGTTTCCTCTCCTCATCACAAGCTTGCTCCCAATGCCAAGTACGCGTCGCCATTGCCGGCGTTGGTTGCGTATTTTGTCAGATTGCGAAGGTTTCTTGCCGGGGTTTTCGTGCGGCGGTATGCTCGGAAAGGGCAATGGAGAAGAGCGCTGTTTCGGTGTttgatctttttctttttaggttTCTTGTGGGGTATGTTTCCTTTTGGTCATGTTGGCGATGACATTCGCCGTCAGGATATCTCATTTGAGATCAAGCCACCTCACGCCAATGCACAGTTAGTCCCTGAGGATCGTGTTCTGAAGCGTGACGAAGGGCTTGTCATCAATCCAATTAGTTTGAGTGTCGATAAAGGGAGTGCAATCGATGAGAGACTAGATTTTGTGCCAAGGAAGCAGTTGATTGTGGTGACTCCCACATATAATCGGGCGCTTCAATCCTATTTTCTTAACAGACTAGGTCATGTGCTGAGGTTGTTACCTCCACCGGTTTTGTGGATTGTGGTGGAAATGAATTCAGCTTCTATGGAGACTGCTGAAATACTGAGGAAAACGGGTGTTATGTATAGGCATTTGGTCTGTGCTAAGAACTCCACAAATGCGAAGGACAGAGGAGTTCATCAAAGGAATACGGCGTTGGAACACATAGAGCGCCATAGACTTGATGGGATTGTCTACTTCGCAGATGACGATAATATATATTCTCTAGAGTTGTTTGAGACCTTGAGGGACATAAGCCGTTTTGGCACTTGGCCCGTTTCAATGCTTGCACAAAGCAAAAACAAGGCCATCTTGGAAGGTCCAGTGTGCAATGGAAGTCAGGTAAGTGGATGGCACACAAATGAGAAAATTAAGAGACTTCGTAGATTTCATGTTGATATGTCTGGATTTGGTTTTAACAGCACAATCTTGTGGGATCCTAAAAGATGGAAGCGCCCTACTTCAAATCCTATTCGACAATTAGACACAGTGAAGGAGGGCTTTCAAGAGACCACCTTTATAGAACAGTTGGTGGAGGATGAGAGTCAAATGGAAGGTTCACCTCCTGGTTGTTCCAAAATAATGAATTGGCATCTCCATTTGGACGCTCATAATATGGTTTATCCCAAGGGTTGGCTGCTTCAGAAAAACCTAGATGCTGTCATCCCCATCGAGTAA 1230 0.4528 MASFRRTLSPAYHDRQYQNGVGAFSVSSPHHKLAPNAKYASPLPALVAYFVRLRRFLAGVFVRRYARKGQWRRALFRCLIFFFLGFLWGMFPFGHVGDDIRRQDISFEIKPPHANAQLVPEDRVLKRDEGLVINPISLSVDKGSAIDERLDFVPRKQLIVVTPTYNRALQSYFLNRLGHVLRLLPPPVLWIVVEMNSASMETAEILRKTGVMYRHLVCAKNSTNAKDRGVHQRNTALEHIERHRLDGIVYFADDDNIYSLELFETLRDISRFGTWPVSMLAQSKNKAILEGPVCNGSQVSGWHTNEKIKRLRRFHVDMSGFGFNSTILWDPKRWKRPTSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPPGCSKIMNWHLHLDAHNMVYPKGWLLQKNLDAVIPIE 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3133 409 SUPERFAMILY Nucleotide-diphospho-sugar transferases 157 402 IPR029044 -
Sto9g3133 409 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 46 405 IPR005027 GO:0015018|GO:0016020
Sto9g3133 409 PANTHER GLYCOSYLTRANSFERASES 46 405 - -
Sto9g3133 409 CDD GlcAT-I 158 387 IPR005027 GO:0015018|GO:0016020
Sto9g3133 409 Pfam Glycosyltransferase family 43 177 385 IPR005027 GO:0015018|GO:0016020
Sto9g3133 409 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 156 400 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3133 Sto-Chr9 31962382 31964724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3133 1 409 Glycosyltransferase AT1G27600 61.985 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3133 K20869 - gmx:100789348 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3133 9 31962382 31964724 Sto9g3133 9 31962382 31964724 ECH